Gene detail information of Glyur000219s00011563.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17710.1 | 7.00E-96 | Pyridoxal phosphate phosphatase-related protein |
| NR | NP_001241414.1 | 7.38E-153 | uncharacterized protein LOC100785878 [Glycine max] |
| COG | YP_461602.1 | 8.00E-06 | phosphoserine phosphatase [Syntrophus aciditrophicus SB] |
| Swissprot | tr|Q9FZ62|PPSP2_ARATH | 2.00E-119 | Inorganic pyrophosphatase 2 |
| trEMBL | tr|C6TG96|C6TG96_SOYBN | 3.00E-153 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G01430.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00219 | 47099 | 48402 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13248 | PHOSPHO2 | EC:3.1.3.74 | Vitamin B6 metabolism | map00750 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000219s00011563.1 | PF06888.7 | Put_Phosphatase | 4 | 226 | 3.20E-88 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.821 |
| SRR1811619 | moderate drought stress | 0.810 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.993 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.905 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.537 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.414 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.231 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.968 |
| SRR2868004 | Drought Stress (root) | 13.463 |
| SRR2967015 | Control (root) | 7.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.698 |
| SRR9715740 | Leaf | 0.987 |
| SRR9715741 | Leaf | 0.733 |
| SRR9715739 | Root | 0.739 |
| SRR9715742 | Root | 7.386 |
| SRR9715743 | Root | 6.966 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.217 |
| SRR8749028 | MeJA induced 9h | 0.384 |
| SRR8749029 | MeJA induced 9h | 0.307 |
| SRR8749030 | Uninduced | 0.552 |
| SRR8749031 | Uninduced | 1.691 |
| SRR8749032 | Uninduced | 3.794 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.136 |
| SRR8400027 | Control - Root | 2.979 |