Gene detail information of Glyur000219s00011562 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17710.1 | 1.00E-66 | Pyridoxal phosphate phosphatase-related protein |
| NR | KHN30036.1 | 2.42E-140 | Inorganic pyrophosphatase 1 [Glycine soja] |
| Swissprot | tr|Q9FZ62|PPSP2_ARATH | 1.00E-81 | Inorganic pyrophosphatase 2 |
| trEMBL | tr|I1M5D5|I1M5D5_SOYBN | 4.00E-132 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G42770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00219 | 43611 | 45342 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13248 | PHOSPHO2 | EC:3.1.3.74 | Vitamin B6 metabolism | map00750 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000219s00011562.1 | PF06888.7 | Put_Phosphatase | 5 | 115 | 2.50E-37 |
| Glyur000219s00011562.1 | PF06888.7 | Put_Phosphatase | 117 | 198 | 2.90E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.891 |
| SRR1783600 | control | 0.844 |
| SRR1783602 | moderate drought stress | 3.456 |
| SRR1811619 | moderate drought stress | 3.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.609 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.196 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.790 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.778 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.115 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 194.697 |
| SRR2868004 | Drought Stress (root) | 115.709 |
| SRR2967015 | Control (root) | 56.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 1.388 |
| SRR9715742 | Root | 16.882 |
| SRR9715743 | Root | 13.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 49.344 |
| SRR8400027 | Control - Root | 70.410 |