Gene detail information of Glyur000218s00011641 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G31335.1 | 5.00E-05 | |
| NR | XP_003519680.1 | 2.19E-31 | PREDICTED: uncharacterized protein LOC100803585 [Glycine max] |
| trEMBL | tr|I1JJT5|I1JJT5_SOYBN | 8.00E-32 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G47840.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00218 | 222831 | 223467 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.671 |
| SRR1783600 | control | 31.291 |
| SRR1783602 | moderate drought stress | 31.660 |
| SRR1811619 | moderate drought stress | 31.606 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 62.199 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 64.713 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.337 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.385 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.969 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.047 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.694 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.929 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 96.852 |
| SRR2868004 | Drought Stress (root) | 27.446 |
| SRR2967015 | Control (root) | 38.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.482 |
| SRR9715740 | Leaf | 4.207 |
| SRR9715741 | Leaf | 4.520 |
| SRR9715739 | Root | 14.827 |
| SRR9715742 | Root | 9.019 |
| SRR9715743 | Root | 12.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 102.216 |
| SRR8749028 | MeJA induced 9h | 41.045 |
| SRR8749029 | MeJA induced 9h | 77.421 |
| SRR8749030 | Uninduced | 4.764 |
| SRR8749031 | Uninduced | 2.562 |
| SRR8749032 | Uninduced | 3.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 83.903 |
| SRR8400027 | Control - Root | 68.384 |