Gene detail information of Glyur000218s00011631 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G04790.4 | 2.00E-09 | |
| NR | NP_001238653.1 | 4.05E-24 | uncharacterized protein LOC100306425 [Glycine max] |
| trEMBL | tr|C6SZC1|C6SZC1_SOYBN | 2.00E-24 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G47760.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00218 | 164030 | 164534 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.633 |
| SRR1783600 | control | 0.490 |
| SRR1783602 | moderate drought stress | 1.506 |
| SRR1811619 | moderate drought stress | 2.304 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.482 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.956 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.298 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.880 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.780 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.174 |
| SRR2868004 | Drought Stress (root) | 0.105 |
| SRR2967015 | Control (root) | 0.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.106 |
| SRR9715740 | Leaf | 16.268 |
| SRR9715741 | Leaf | 5.531 |
| SRR9715739 | Root | 0.427 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.107 |
| SRR8749028 | MeJA induced 9h | 0.836 |
| SRR8749029 | MeJA induced 9h | 1.179 |
| SRR8749030 | Uninduced | 0.164 |
| SRR8749031 | Uninduced | 0.562 |
| SRR8749032 | Uninduced | 0.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.069 |
| SRR8400027 | Control - Root | 0.094 |