Gene detail information of Glyur000218s00011629 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G59960.1 | 3.00E-49 | NAD(P)-linked oxidoreductase superfamily protein |
| NR | XP_003552668.1 | 2.08E-112 | PREDICTED: NAD(P)H-dependent 6'-deoxychalcone synthase-like [Glycine max] |
| COG | YP_004193516.1 | 2.00E-36 | aldehyde reductase [Desulfobulbus propionicus DSM 2032] |
| Swissprot | tr|P26690|6DCS_SOYBN | 1.00E-89 | NAD(P)H-dependent 6'-deoxychalcone synthase |
| trEMBL | tr|I1N520|I1N520_SOYBN | 8.00E-113 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G52250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00218 | 154522 | 156416 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000218s00011629.1 | PF00248.16 | Aldo_ket_red | 10 | 172 | 6.80E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.217 |
| SRR1783600 | control | 3.087 |
| SRR1783602 | moderate drought stress | 5.224 |
| SRR1811619 | moderate drought stress | 5.295 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.672 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.405 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.650 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.006 |
| SRR2967015 | Control (root) | 0.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.386 |
| SRR9715740 | Leaf | 0.295 |
| SRR9715741 | Leaf | 0.268 |
| SRR9715739 | Root | 4.681 |
| SRR9715742 | Root | 0.729 |
| SRR9715743 | Root | 0.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.002 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.271 |
| SRR8400027 | Control - Root | 7.669 |