Gene detail information of Glyur000218s00011619 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G04850.1 | 5.00E-73 | Auxin-responsive family protein |
| NR | XP_004510172.1 | 1.46E-145 | PREDICTED: uncharacterized protein LOC101493370 [Cicer arietinum] |
| Swissprot | tr|Q9SJ74|B561G_ARATH | 5.00E-101 | Cytochrome b561 and DOMON domain-containing protein At2g04850 (Precursor) |
| trEMBL | tr|I3S8L2|I3S8L2_LOTJA | 1.00E-142 | Uncharacterized protein {ECO:0000313|EMBL:AFK36604.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00218 | 117673 | 118377 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000218s00011619.1 | PF03188.11 | Cytochrom_B561 | 80 | 170 | 1.80E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.959 |
| SRR1783600 | control | 3.157 |
| SRR1783602 | moderate drought stress | 1.097 |
| SRR1811619 | moderate drought stress | 1.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.168 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.997 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.522 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.720 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.763 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.408 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.124 |
| SRR2868004 | Drought Stress (root) | 11.482 |
| SRR2967015 | Control (root) | 10.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.318 |
| SRR9715740 | Leaf | 0.669 |
| SRR9715741 | Leaf | 0.772 |
| SRR9715739 | Root | 1.666 |
| SRR9715742 | Root | 11.656 |
| SRR9715743 | Root | 7.278 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.575 |
| SRR8749028 | MeJA induced 9h | 0.433 |
| SRR8749029 | MeJA induced 9h | 0.173 |
| SRR8749030 | Uninduced | 0.271 |
| SRR8749031 | Uninduced | 0.380 |
| SRR8749032 | Uninduced | 0.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.322 |
| SRR8400027 | Control - Root | 9.583 |