Gene detail

Gene detail information of Glyur000218s00011609.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G35750.1	0	histidine kinase 2
NR	XP_003545073.1	0	PREDICTED: histidine kinase 2-like [Glycine max]
COG	YP_644044.1	1.00E-87	multi-sensor hybrid histidine kinase [Rubrobacter xylanophilus DSM 9941]
Swissprot	tr\|Q9C5U2\|AHK2_ARATH	0	Histidine kinase 2
trEMBL	tr\|K7M476\|K7M476_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G01040.2}

Sequence

Transcript Sequence

>Glyur000218s00011609.1
CCTCAATTTAGCTAATGCTGCACACCAAACTGGAGAGAGAAAGAAAAGCAAAGAAAAGAAGGGACATTTTACTTTCAGAAAAACAAAAAATGGGGGTTATTATCTCAGCATTTTGGAAGATGTTATTATTGATGGGGCACTCTCTGAGATTGTTGTTCCACTCTTGATGCTTCTTTTGGCTGATCAGTGTCCCAGTGAGGCAGAAACAACCTGTTATAGAAAAGGAACAAAATTTTCCTATCTCACTCACAATTCTCTGCCAAAAACACAACTGAGTCTGATTCACATCTTGTTGTGTGGTGTGATTATTGTCCCCCATGCTCCTCTTCCACCTCTGGTTTTTGATATCTCTTCAAGCTTCACACAAAAAAACAACAAACTCCTGGACCAACAGAGATAAGGAAAAAGGTTACTTGGACCACTTTCAAGCAACATAGTTCGTTGAGATATATGAACCGGGTTTCATGAAAGTTTCCCCTTTTTGGTGGTTGGGTTCTGTTGATGAAAATCTCATAAAGCATCAAACTTTATGAGTTTTGAGTTGTGGGGTTGCTGAAAGAAATTTTGGGTTTTGCTTCAATTTTGCTTAGCTGTTGAAGATTCATGGTGGGGTGCTGCTTGGTGGTCCAGTTTTTTGAATGTTCTTCTGAAGAAGCAGGGGCGTACCTTGAATCTTCAGGAGAGTTTGTTGTGAAGATACGTGGGTGAATTTGGCAAGCATGTCTGTGAATCGAAGGCTTTCTGGTCCANATGGAAGATTGGCACCAAGTATGAAGTCTTGGAAGGTAAATGAGCCTCTGCATGGGTCTAATTCTCATTCTCATAGGACATGTAGGAGGAAGCCTTTGCTCCTTTGGGTTTTTGGAGTTGTTGTTGTTGCTTTGGGGAGTGTTTGGTTTGCCCTGAGTTTNAATAGTAAGCATTTGACCAAAGAAGCAGCTTGTGAAGAGAGTGAACAAGCCTTGCTACAACGTTACAATGTCAGTAGGAAGCAGCTCAATGCTTTGGCTCCCTTATTCTCTGGATCGGATCAGATTTTGTCCAACTGTATTGATGAAAGGAGACTTCAAATGCTGTTAAGCAGTGGCATAGTCAGCACTTCGCAGTCGACGTGTCCAGAGAATCAGGAGTTGCAAAAGGAGCATAGATGTGTTGCAGACACTCTAGAACCTATAGAACAATGCCCAATTCTCGATNATTTTGTCCAGACAAGGCTTGAATTATCATTCCCATTGAAAGCACATGTGACATTGGCCTCACACTCTGCACTCTTGTCCAATTTGGATCATGTGAATTTATCTAATTTAATTAAAGGATGCTGCTGGGTCCTTATTGGAATTATATTGTCCCACAAGTTGTCTGGCTTCTGTTTACTATGGAGGAGTCAAAAGCAGAAGCTAGTTCAGGGGCATCCAGCTGCTAAACAAAAGCAGTGGCAACATTTCGTGCAGGGTCATTCAAAGGGTGGTGGGAGGTGGAGAAAAAAGTTGCTAGTTATATTTGTGTCACTTGGAATAGTTGGGTCCGCTTGGTTATTTTGGCACCTACATTTGGACATTATGCAAAGAAGAGAAGAAATGCTTGCCAATATGTGTGATGAGCGAGCCCGTATGCTGCAAGATCAATTTAATGTGAGCATGAACCATGTTCATGCTCTGGCCCTTCTTGTGTCTACCTTTCACCACGGTAAACATCCTTCTGCAATTGACCAGAAAATTTTCGGAGAATATACAGAGAGTACAGCATTTGAGAGACCACTAACTAGTGGTGTTGCTTATGCTTTGAAAGTTCTCCATTCTGATAGGATGGATTTTGAGAAGCAGCANGGGTGGACAATTAAGAAAATGGAAACTGAGAATGAGGCATTAGTTCAAGATTGTATTCCAGAAAATTTGGATCCGGCACCCATTCAAGATGAATATGCACCAGTGATATTTGCTCAAGAAACAGTTTCCCATATTGTATCTATTGACATGATGTCAGGGAAGGAGGATCGTGAGAATATTTTGCGAGCAAGGTCATCTGGAAAGGGGGTTCTGACATCCCCTTTTAAACTACTAAAGTCCAATCACCTGGGTGTTGTACTCACATTTGCTGTATATAACACTAATCTTCCTCCAGATGCTACACCGGAGCAGCGTATTGAAGCTACTGTGGGGTATCTGGGTGCATCTTATGATGTTCCATCACTGGTGGACAAGCTTCTCCACCAACTTGCCAGCAAACAAACCATTGTTGTCAATGTTTACGACACAACTAATGCATCTGAACCTATCACAATGTATGGTACTGATGTTGCTGATACTGGCCTATTACACATAAGCAGTCTAGATTTTGGGGATCCACTACGAAAACATGAGATGCACTGCAGGTTCAAGCATAGGCCTCCACTACCTTGGACGGCAATCAATGCATCTGTGGGGGTATTTGTTATTACCTTGCTTCTGGGTCATATTTTTTATGCAGCAATAAATCGAATAGCAAAAGTGGAGGATGACTATCGTCAAATGAGAGAGCTGAAAGTTCTTGCTGAAGCCGCAGACGTGGCAAAATCTCAGTTTCTTGCAACAGTTTCACATGAGATCAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGACACTGAGCTTGATGAAAACCAGATGGATTGTGCGCAAACTGCCCACCAGAGTGGTAAAGATCTTATATCAGTCATAAATGAGGTTCTTGATCAGGCTAAGATCGAGGCAGGCAAGCTTGAACTTGAAGCCGTAGCTTTTGATCCACATGTTATTCTAGATGAAGTTCTATCACTTTTCTCTGAAAAATCTAATGAAAAAGGAATTGAGTTGGCTGTTTATGCATCCAATCAAGTACCTGAAGTTTTAATTGGAGATCCTAAACGGTTCCGGCAAATAATTACCAATCTTGTTGGCAATTCACTNAAGTTCACTCACGATAAAGGACATGTTTTTGTCTCGATTCATCTGGCAAATGAAGTGAGGAACCCACTTCATATTATGGATGCAGTGCTGAGAGAAGGCTTAAACTTGGATCTGGACATATCGGAAAGAACATATAATACATTAAGTGGTTTTCCTGTAGGNAACAGATGGAAAAGCTGGGCGAATTTTAAAACGTTAAATAGCATAAATTCGATGGATGAGCCTGAAACTATTCAACTACTAGTAACAGTTGAGGACACAGGCATAGGAATTCCTACAGATGCACAGAGCCGCATATTTACCCCTTTTATGCAGGCTGATAGTTCCACGTCCCGAACGTATGGTGGAACTGGAATAGGGCTGAGCATTAGTAAATGTCTAGTTGACCTCATGGGAGGAGAAATTGGATTTGTAAGTGAGCCTGGAATTGGAAGTACTTTTTCATTTACTGGAAATTTCAGCAAAGGAGAAACCACATCTTTGGATGCAAAGTGGCAGAAGTACAATCCCTTTGTCTCTGAGTTCCAAGGATTGAGAGCATTAGTCATAGATAGAAGAAAAATCCGAGCCGAGGTTACAAGATATCATCTGCAGAGGTTGGGGATATCTGTGGATGTAACTTCCAGTCTTAAATCGTCATGCTTTTGTCTATCTGATACTCGCAACACAAGTATGTCAACGCGGTTGGCTATGATTCTTATAGACAAGGATTGTTGGGATAAGGAAAGTAGTATCTTATACACAATCAAGAAACACAGACAGAATGGCATCAAAGGGGACCCAATAAACTTTNCAAAGATTTTTCTCCTGGCCACTCATCTTAGCCCCATTGAACACGATGAGCTCAAGTCAGTTGGTATCATAGATAATATACTAATGAAGCCTCTTTGGCTAAGTGTTTTGATTCGCTACTACAGAGAAACCCTTGGAACTGAAAAGAAACAAATAAATAGAAAGCAAGTATGCAAACTTGGAAATTTATTAGCGCACAAAAATTTTTTGGTGGTTGATGACAACGCAGTGAACAGAAAAGTTGCAGAAGGTGTTCTGCAGAGATATGGGGCAATAGTTACCTCTGTGGAGAGTGGCAGGGCTGCTCTAAAGATGCTTAAGCCACCGCATAATTTCGATGCCTGTTTCATGGATCTCCAAATGCCAGAAATGGATGGTTTTGAGGTGACAAGGCAAATCCGCTGTCTGGAGAGTGAGTTAAATGAGAAAATTGTGTGTGGGCAAGCATCAGCAGAGATGTTCGGTAACATCTCTTATTGGCACACTCCAATACTAGCTATGACAGCTGATGTAACTCAGTCTTCAAATGAAGAATGCAGAAAGTGTGGGATGGATGACTACGTGTCGAAGCCATTTGAAGAAGAGCAGCTCTATATGGCAGTGGCACGAGAACTGCATGCCAGCATCAAAGCTGTACCAATTCAGCATAATGGATCTCAGCTATGGCCTTGTTTAGTTATTAAAGCTGATTTCGAGTGCAATAAATTATCAATAGCATTTTTTTGGGGAAGTGGAAGATGTTACATGGACACCGGTGTGTCTTCATCAACAAAGCCACTCTCAAATCCCACTCCAAAAATGGCAATATTCANGTCGAAGTTAATGCTTCCTCTACTCTTCCTGTCCATGATTCTTTCAAAAACTGCATATGCCGAGTTCGAGCAATGGTGTGTAGCAGATGAGCAGAGCACAGACTATGAGTTACAGGGAGCCTTGGATTGGGCTTGTGGGAAAGGAGGTGCAGATTGTAGCAAAATTCAAGTAAACCAACCTTGCTATTTCCCAAACACCTTAAAAGACCATGCTTCTTATGCCTTCAACAGCTACTTTCAGAAGTTCAAGCACAATGGCCATGGTTCTTGCCACTATGACTTCATTCCCTGATTGCAANTGTCAACGAATTGAAGACTCAAAATAACTCCAGCAAAAATTAAACTAGAGTTGGACCTATTTTTTTGGAATGTTTTCTACCATGTCAAGGCACACTAAAGCAGTTGACAGAAGGAAAAAAAAAAAAGGCACACTCAAGTTTGTGA

Protein Sequence

>Glyur000218s00011609.1
MSVNRRLSGPXGRLAPSMKSWKVNEPLHGSNSHSHRTCRRKPLLLWVFGVVVVALGSVWFALSXNSKHLTKEAACEESEQALLQRYNVSRKQLNALAPLFSGSDQILSNCIDERRLQMLLSSGIVSTSQSTCPENQELQKEHRCVADTLEPIEQCPILDXFVQTRLELSFPLKAHVTLASHSALLSNLDHVNLSNLIKGCCWVLIGIILSHKLSGFCLLWRSQKQKLVQGHPAAKQKQWQHFVQGHSKGGGRWRKKLLVIFVSLGIVGSAWLFWHLHLDIMQRREEMLANMCDERARMLQDQFNVSMNHVHALALLVSTFHHGKHPSAIDQKIFGEYTESTAFERPLTSGVAYALKVLHSDRMDFEKQXGWTIKKMETENEALVQDCIPENLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARSSGKGVLTSPFKLLKSNHLGVVLTFAVYNTNLPPDATPEQRIEATVGYLGASYDVPSLVDKLLHQLASKQTIVVNVYDTTNASEPITMYGTDVADTGLLHISSLDFGDPLRKHEMHCRFKHRPPLPWTAINASVGVFVITLLLGHIFYAAINRIAKVEDDYRQMRELKVLAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTELDENQMDCAQTAHQSGKDLISVINEVLDQAKIEAGKLELEAVAFDPHVILDEVLSLFSEKSNEKGIELAVYASNQVPEVLIGDPKRFRQIITNLVGNSLKFTHDKGHVFVSIHLANEVRNPLHIMDAVLREGLNLDLDISERTYNTLSGFPVGNRWKSWANFKTLNSINSMDEPETIQLLVTVEDTGIGIPTDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVDLMGGEIGFVSEPGIGSTFSFTGNFSKGETTSLDAKWQKYNPFVSEFQGLRALVIDRRKIRAEVTRYHLQRLGISVDVTSSLKSSCFCLSDTRNTSMSTRLAMILIDKDCWDKESSILYTIKKHRQNGIKGDPINFXKIFLLATHLSPIEHDELKSVGIIDNILMKPLWLSVLIRYYRETLGTEKKQINRKQVCKLGNLLAHKNFLVVDDNAVNRKVAEGVLQRYGAIVTSVESGRAALKMLKPPHNFDACFMDLQMPEMDGFEVTRQIRCLESELNEKIVCGQASAEMFGNISYWHTPILAMTADVTQSSNEECRKCGMDDYVSKPFEEEQLYMAVARELHASIKAVPIQHNGSQLWPCLVIKADFECNKLSIAFFWGSGRCYMDTGVSSSTKPLSNPTPKMAIFXSKLMLPLLFLSMILSKTAYAEFEQWCVADEQSTDYELQGALDWACGKGGADCSKIQVNQPCYFPNTLKDHASYAFNSYFQKFKHNGHGSCHYDFIP

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00218	63025	73815	+

Gene family

Gene family	subfamily
Transcription Factors Family	Orphans

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14489	AHK2_3_4	EC:2.7.13.3	Plant hormone signal transduction	map04075
			Plant hormone signal transduction	map04075
			Plant hormone signal transduction	map04075
			Plant hormone signal transduction	map04075
			Plant hormone signal transduction	map04075

Gene Ontology

biological_process

GO:0000160 phosphorelay signal transduction system

GO:0007165 signal transduction

GO:0016310 phosphorylation

cellular_component
GO:0016020 membrane

molecular_function

GO:0000155 phosphorelay sensor kinase activity

GO:0004871 signal transducer activity

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000218s00011609.1	PF03924.8	CHASE	327	523	3.10E-40
Glyur000218s00011609.1	PF00512.20	HisKA	610	675	8.30E-18
Glyur000218s00011609.1	PF02518.21	HATPase_c	722	889	2.90E-31
Glyur000218s00011609.1	PF00072.19	Response_reg	1073	1204	2.10E-20
Glyur000218s00011609.1	PF07983.8	X8	1298	1366	3.20E-13

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	15.971
SRR1783600	control	16.106
SRR1783602	moderate drought stress	24.920
SRR1811619	moderate drought stress	24.705

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	17.849
DRR006520	Root Summer glycyrrhizin high producing strain	17.541
DRR006521	Root Winter glycyrrhizin high producing strain	7.336
DRR006522	Root Winter glycyrrhizin high producing strain	7.151
DRR006523	Root Summer glycyrrhizin low producing strain	20.329
DRR006524	Root Summer glycyrrhizin low producing strain	20.447
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.163
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.073

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	24.949
SRR2868004	Drought Stress (root)	25.232
SRR2967015	Control (root)	26.074

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	11.872
SRR9715740	Leaf	12.430
SRR9715741	Leaf	13.886
SRR9715739	Root	1.637
SRR9715742	Root	17.812
SRR9715743	Root	15.562

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.464
SRR8749028	MeJA induced 9h	12.367
SRR8749029	MeJA induced 9h	7.630
SRR8749030	Uninduced	6.428
SRR8749031	Uninduced	5.147
SRR8749032	Uninduced	6.823

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	23.003
SRR8400027	Control - Root	29.028