Gene detail

Gene detail information of Glyur000218s00011606

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G07770.1	0	HEAT SHOCK PROTEIN 89.1
NR	XP_003617951.1	0	Heat-shock protein [Medicago truncatula]
COG	YP_006763165.1	4.00E-135	chaperone protein HtpG [Desulfobacula toluolica Tol2]
Swissprot	tr\|P51819\|HSP83_IPONI	4.00E-180	Heat shock protein 83
trEMBL	tr\|G7KEN6\|G7KEN6_MEDTR	0	Heat shock protein 81-2 {ECO:0000313\|EMBL:AET00910.1}

Sequence

Transcript Sequence

>Glyur000218s00011606.1
GAAAAATAAAGGTGATTTTTCTCACCGAGAAAAAGGCGATCGAGAAGCTTCGGAAACGCCATTTTATGGTGACACACACAAACCCCTTCTAAAACCCTACTACCAATTNGCTGCTCCCTGCTCAACGCAGTTTTCGAATCTCACACTTCCTTCTTCTTCACCATGCACAGACTCTCTAGGCGCTCTTCCTCCGTCTCCGCCGTACTCCGCTACGGCGGCGCTCTTCGCCGTGACGCAGCTGTCCCACTTTCCTCTCACCTGGTGGGCGAGAATGACACGAAAGCCAGATGGTATTCTTTCTTGATTTCTGAGAAATCAACTACTATTAAATCTACAAATCAGCCAAACTTGAAAAGGGAGCTGTTTTTGGGCAAACGATATGAATCAAGTGCTGCAGAATCTACTGCATCCAGTTCCCCACCAGCTGAGAGATTTGAGTACCAAGCAGAGGTTAGTCGGCTCATGGACCTCATTGTTAACAGTTTATACAGTAACAAGGAGGTTTTTCTCAGGGAACTTATCAGTAATGCAAGTGATGCCTTGGATAAGCTGCGATTTTTGAGTGTTACAGAGCCTGAACTGTCAAAGGATGCCGTTGATTTTGATATCCGAATTCAAGCTGATAAAGATAATGGGATTATAACTATTACTGATACAGGCATTGGTATGACTAGGCACGAACTAGTTGATTGTCTCGGAACTATTGCTCAAAGTGGAACTGCAAAGTTTTTGAAGGCTCTAAAGGTGGTTGTCTCAACCAAGAGTCCAAAATCTGATAAACAATATGTTTGGGAAGGAGAGGCAAATGCTAGCTCATATACCATATCCGAGGAGACAGATCCCGAGAAGCTGATTCCAAGAGGAACTCGCCTTACTCTGTATCTTAAGAGGGATGACAAAGGTTTTGCTCATCCAGAGCGGATTCAGAAGCTTGTGAAGAACTACTCCCAATTTGTCTCATTCCCAATATACACTTGGCAGGAAAAGGGATACACCAAAGAAGTGGAGGTTGATGAGGATCCAGCCGAAGCCAAAAAGGATGACCAGGATGAGAAGACTGAGAAGAAGAAGAAGAAAACTAAAACTGTTGTTGAGAAATACTGGGATTGGGAGCTCACTAATGAGACCCAACCTATCTGGCTTCGTAATCCTAAAGAAGTCACTAAGGAGGANTACAACGAGTTTTACAAGGCAACTTTTAATGAATACCTGGAGCCATTGGCATCATCACACTTTACCACAGAGGGTGAGGTAGAGTTTAGGTCTATACTTTATGTTCCTGCCTATGCTCCCTCAGGAAAGGATGACATAATCAATCCCAAGACCAAAAATATAAGACTGTATGTGAAGAGAGTATTCATTTCAGATGACTTTGATGGAGAACTGTTCCCCAGATACTTAAGTTTTGTCAAAGGTGTGGTTGACTCGAATGACCTTCCACTCAATGTGTCACGTGAAATTCTTCAAGAGAGCCGCATAGTGCGGATCATGCGGAAACGGTTAGTTAGAAAGGCTTTTGACATGATTCTGGGGATATCCATGAGTGATAACAGAGAGGACTATGANAAGTTCTGGGAGAACTTTGGCAAACACTTGAAATTGGGCTGCATTGAAGACCGTGAGAATCACAAACGTATCGCTCCATTGCTTCGGTTTTTCTCATCCCAAAGCGATGAAGAGTTGATAAGCTTGGACGAATATGTTGACAACATGAAACCTGATCAAAAGGACATTTATTACATTGCTGCTGACAGTGTGACTAGTGCAAAGAACACGCCTTTCTTGGAGAAACTNGCGGAGAAGGATCTCGAAGTGCTGTTTTTGGTGGATCCAATAGATGAGGTTGCCATTCAAAACCTTAAATCATACAAGGAAAAGAATTTTGTTGACATTAGCAAGGAAGACTTGGATCTAGGTGAGAAGAATGAGGAAAANGAGAAAGAGATGAAGCAAGAATTTGGCAAAACAATTGACTGGATCAAGAAACGTTTGGGAGATAAAGTTGCAAGTGTGCAAATTTCAAACCGACTTAGCTCTTCACCTTGTGTTCTGGTGTCAGGAAAATTTGGTTGGTCTGCAAACATGGAAAGGCTAATGAAGGCACAATCTATGGGTGATGCCTCCAGCTTGGAATTCATGAGAAGCAGAAGGGTGTTCGAGATCAACCCTGACCACCCTATCATCAGGAACTTAGATGCTGCATGCAAAACAAATCCTGATGATCAGGAGGCCCTCAGAGCTATTGATCTNTTGTATGATGCAGCTTTGGTTTCCAGTGGTTTTACGCCTGATGATCCAGCACAGCTTGGAGGAAAGATATACGAGATGATGGGTATGGCTCTTTCTGGTAAATGGTCAGATCCTAGTCAGTTTCAGCCCACTCAAACCCAGTCTCATATCCCAGAAACTGTAGAAGCTGAAGTGGTTGANCCTACTGAAGCTGGCAGTCAGAAGTGAAAAATAGAGATTTTTGCTCTACTGCATACGGGCAAAATCATATTTTTGAACATTGGTGGTAGTATTTTATAGATATCTTGAGGAACTTTCNGTATAATGCCACATCTGGAAGCACATGCAATTCTTTGTTTTCGGCGTGATATTAGTTAAAATATCCAGTATAGTCGAGTATTATATTTTGGCATTTCAGTAGTTTTTCTTTTATTTTGGAAAAGGTATCCTATANAATCTGATCAATGTGTGCCACAGAACAAATTATAAAAAGTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00218	36039	41751	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006457 protein folding

GO:0006950 response to stress

molecular_function

GO:0005524 ATP binding

GO:0051082 unfolded protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000218s00011606.1	PF00183.13	HSP90	252	735	1.10E-172

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	31.655
SRR1783600	control	31.794
SRR1783602	moderate drought stress	33.689
SRR1811619	moderate drought stress	33.403

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	68.248
DRR006520	Root Summer glycyrrhizin high producing strain	67.758
DRR006521	Root Winter glycyrrhizin high producing strain	27.463
DRR006522	Root Winter glycyrrhizin high producing strain	26.466
DRR006523	Root Summer glycyrrhizin low producing strain	55.803
DRR006524	Root Summer glycyrrhizin low producing strain	56.152
DRR006525	Leaf Summer glycyrrhizin high producing strain	13.753
DRR006526	Leaf Summer glycyrrhizin high producing strain	13.614

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	55.517
SRR2868004	Drought Stress (root)	35.017
SRR2967015	Control (root)	31.825

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	22.028
SRR9715740	Leaf	40.501
SRR9715741	Leaf	24.176
SRR9715739	Root	3.546
SRR9715742	Root	42.485
SRR9715743	Root	33.751

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	81.094
SRR8749028	MeJA induced 9h	43.265
SRR8749029	MeJA induced 9h	48.359
SRR8749030	Uninduced	6.675
SRR8749031	Uninduced	3.352
SRR8749032	Uninduced	7.010

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	64.035
SRR8400027	Control - Root	54.134