Gene detail information of Glyur000217s00014865 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G35810.1 | 1.00E-65 | |
| NR | AFK36770.1 | 9.32E-116 | unknown [Lotus japonicus] |
| COG | YP_001659103.1 | 8.00E-48 | hypothetical protein MAE_40890 [Microcystis aeruginosa NIES-843] |
| trEMBL | tr|I3S928|I3S928_LOTJA | 3.00E-116 | Uncharacterized protein {ECO:0000313|EMBL:AFK36770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00217 | 217905 | 220314 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.416 |
| SRR1783600 | control | 5.387 |
| SRR1783602 | moderate drought stress | 6.091 |
| SRR1811619 | moderate drought stress | 6.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.798 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.469 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.297 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.176 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.505 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.906 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.869 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.606 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.837 |
| SRR2868004 | Drought Stress (root) | 14.713 |
| SRR2967015 | Control (root) | 12.270 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.925 |
| SRR9715740 | Leaf | 40.149 |
| SRR9715741 | Leaf | 28.754 |
| SRR9715739 | Root | 4.573 |
| SRR9715742 | Root | 5.975 |
| SRR9715743 | Root | 5.200 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.708 |
| SRR8749028 | MeJA induced 9h | 5.420 |
| SRR8749029 | MeJA induced 9h | 7.441 |
| SRR8749030 | Uninduced | 10.494 |
| SRR8749031 | Uninduced | 4.668 |
| SRR8749032 | Uninduced | 6.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.180 |
| SRR8400027 | Control - Root | 10.326 |