Gene detail information of Glyur000217s00014862 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G07930.2 | 4.00E-06 | GTP binding Elongation factor Tu family protein |
| NR | XP_004496343.1 | 2.27E-07 | PREDICTED: uncharacterized protein LOC101511759 [Cicer arietinum] |
| Swissprot | tr|Q41803|EF1A_MAIZE | 2.00E-07 | Elongation factor 1-alpha |
| trEMBL | tr|K7LKQ5|K7LKQ5_SOYBN | 3.00E-10 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G35871.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00217 | 206369 | 207028 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.100 |
| SRR1783600 | control | 0.061 |
| SRR1783602 | moderate drought stress | 0.090 |
| SRR1811619 | moderate drought stress | 0.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.823 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.162 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.605 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.552 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.219 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.400 |
| SRR2868004 | Drought Stress (root) | 1.970 |
| SRR2967015 | Control (root) | 2.897 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.913 |
| SRR9715740 | Leaf | 4.358 |
| SRR9715741 | Leaf | 14.637 |
| SRR9715739 | Root | 0.295 |
| SRR9715742 | Root | 1.943 |
| SRR9715743 | Root | 0.745 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.058 |
| SRR8749030 | Uninduced | 0.176 |
| SRR8749031 | Uninduced | 0.035 |
| SRR8749032 | Uninduced | 0.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.960 |
| SRR8400027 | Control - Root | 16.884 |