Gene detail information of Glyur000217s00014842 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G71930.1 | 6.00E-21 | vascular related NAC-domain protein 7 |
| NR | XP_006589458.1 | 3.48E-74 | PREDICTED: NAC domain-containing protein 7-like isoform X3 [Glycine max] |
| Swissprot | tr|Q84WP6|NAC43_ARATH | 6.00E-21 | NAC domain-containing protein 43 |
| trEMBL | tr|K7LKR6|K7LKR6_SOYBN | 1.00E-74 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G36050.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00217 | 60339 | 63511 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000217s00014842.1 | PF02365.10 | NAM | 19 | 66 | 1.40E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.279 |
| SRR1783600 | control | 0.264 |
| SRR1783602 | moderate drought stress | 0.145 |
| SRR1811619 | moderate drought stress | 0.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.658 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.670 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.562 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.271 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.127 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.373 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.539 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.744 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.845 |
| SRR2868004 | Drought Stress (root) | 8.116 |
| SRR2967015 | Control (root) | 2.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.120 |
| SRR9715740 | Leaf | 0.617 |
| SRR9715741 | Leaf | 2.552 |
| SRR9715739 | Root | 0.156 |
| SRR9715742 | Root | 0.436 |
| SRR9715743 | Root | 0.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.968 |
| SRR8749028 | MeJA induced 9h | 1.093 |
| SRR8749029 | MeJA induced 9h | 0.512 |
| SRR8749030 | Uninduced | 1.723 |
| SRR8749031 | Uninduced | 0.224 |
| SRR8749032 | Uninduced | 0.352 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.990 |
| SRR8400027 | Control - Root | 0.988 |