Gene detail information of Glyur000216s00014159 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G51405.1 | 2.00E-72 | myosin-related |
| NR | XP_007131542.1 | 0 | hypothetical protein PHAVU_011G021900g [Phaseolus vulgaris] |
| trEMBL | tr|V7AHI8|V7AHI8_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW03536.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00216 | 180453 | 183655 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.786 |
| SRR1783600 | control | 0.732 |
| SRR1783602 | moderate drought stress | 0.287 |
| SRR1811619 | moderate drought stress | 0.311 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.148 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.211 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.533 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.479 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.143 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.211 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.713 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.730 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.968 |
| SRR2868004 | Drought Stress (root) | 2.795 |
| SRR2967015 | Control (root) | 3.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.498 |
| SRR9715740 | Leaf | 0.171 |
| SRR9715741 | Leaf | 0.805 |
| SRR9715739 | Root | 0.203 |
| SRR9715742 | Root | 0.372 |
| SRR9715743 | Root | 0.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 36.795 |
| SRR8749028 | MeJA induced 9h | 37.670 |
| SRR8749029 | MeJA induced 9h | 13.863 |
| SRR8749030 | Uninduced | 14.644 |
| SRR8749031 | Uninduced | 4.775 |
| SRR8749032 | Uninduced | 4.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.162 |
| SRR8400027 | Control - Root | 0.851 |