Gene detail information of Glyur000216s00014154 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23220.1 | 7.00E-14 | cytochrome P450, family 81, subfamily D, polypeptide 6 |
| NR | XP_002510139.1 | 1.82E-23 | cytochrome P450, putative [Ricinus communis] |
| Swissprot | tr|Q6WNQ9|C81E9_MEDTR | 2.00E-17 | Isoflavone 3'-hydroxylase {ECO:0000303|PubMed:14617078} (Fragment) |
| trEMBL | tr|B9R746|B9R746_RICCO | 7.00E-24 | Cytochrome P450, putative {ECO:0000313|EMBL:EEF52326.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00216 | 151323 | 151616 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.412 |
| SRR1783600 | control | 5.729 |
| SRR1783602 | moderate drought stress | 10.707 |
| SRR1811619 | moderate drought stress | 10.160 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.904 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.125 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.627 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.922 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 52.238 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 50.035 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.611 |
| SRR2868004 | Drought Stress (root) | 8.138 |
| SRR2967015 | Control (root) | 10.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.885 |
| SRR9715741 | Leaf | 0.111 |
| SRR9715739 | Root | 4.454 |
| SRR9715742 | Root | 4.361 |
| SRR9715743 | Root | 4.023 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.428 |
| SRR8749028 | MeJA induced 9h | 2.496 |
| SRR8749029 | MeJA induced 9h | 0.416 |
| SRR8749030 | Uninduced | 3.415 |
| SRR8749031 | Uninduced | 2.401 |
| SRR8749032 | Uninduced | 1.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.220 |
| SRR8400027 | Control - Root | 7.490 |