Gene detail information of Glyur000216s00014152 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67250.1 | 6.00E-56 | Proteasome maturation factor UMP1 |
| NR | XP_004505621.1 | 7.29E-88 | PREDICTED: cyclin-B1-2-like [Cicer arietinum] |
| Swissprot | tr|Q0DWQ7|CCB12_ORYSJ | 7.00E-28 | Cyclin-B1-2 |
| trEMBL | tr|I1LIJ4|I1LIJ4_SOYBN | 4.00E-84 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G09870.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00216 | 140115 | 142972 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000216s00014152.1 | PF05348.6 | UMP1 | 6 | 132 | 1.40E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 67.481 |
| SRR1783600 | control | 67.462 |
| SRR1783602 | moderate drought stress | 67.230 |
| SRR1811619 | moderate drought stress | 67.938 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 90.896 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 89.320 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 108.710 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 104.355 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 76.798 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 75.954 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 59.831 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 59.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 187.941 |
| SRR2868004 | Drought Stress (root) | 157.310 |
| SRR2967015 | Control (root) | 130.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 71.428 |
| SRR9715740 | Leaf | 82.196 |
| SRR9715741 | Leaf | 83.102 |
| SRR9715739 | Root | 48.994 |
| SRR9715742 | Root | 57.115 |
| SRR9715743 | Root | 56.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 288.503 |
| SRR8749028 | MeJA induced 9h | 214.595 |
| SRR8749029 | MeJA induced 9h | 252.340 |
| SRR8749030 | Uninduced | 252.986 |
| SRR8749031 | Uninduced | 159.872 |
| SRR8749032 | Uninduced | 154.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 149.646 |
| SRR8400027 | Control - Root | 133.358 |