Gene detail information of Glyur000216s00014144 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17160.1 | 1.00E-17 | |
| NR | XP_003607398.1 | 1.31E-117 | hypothetical protein MTR_4g077590 [Medicago truncatula] |
| trEMBL | tr|G7JRR2|G7JRR2_MEDTR | 5.00E-118 | Uncharacterized protein {ECO:0000313|EMBL:AES89595.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00216 | 100299 | 103335 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.618 |
| SRR1783600 | control | 3.728 |
| SRR1783602 | moderate drought stress | 1.994 |
| SRR1811619 | moderate drought stress | 1.892 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.136 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.668 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.999 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.064 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.126 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.106 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.043 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.445 |
| SRR2868004 | Drought Stress (root) | 11.140 |
| SRR2967015 | Control (root) | 10.852 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.587 |
| SRR9715740 | Leaf | 2.503 |
| SRR9715741 | Leaf | 1.360 |
| SRR9715739 | Root | 1.500 |
| SRR9715742 | Root | 3.576 |
| SRR9715743 | Root | 3.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.792 |
| SRR8749028 | MeJA induced 9h | 16.185 |
| SRR8749029 | MeJA induced 9h | 6.500 |
| SRR8749030 | Uninduced | 5.397 |
| SRR8749031 | Uninduced | 0.154 |
| SRR8749032 | Uninduced | 0.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.740 |
| SRR8400027 | Control - Root | 11.583 |