Gene detail information of Glyur000216s00014142 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17070.1 | 1.00E-48 | |
| NR | XP_004505615.1 | 3.73E-128 | PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2-like [Cicer arietinum] |
| trEMBL | tr|G7JRR4|G7JRR4_MEDTR | 7.00E-119 | PPP4R2 protein {ECO:0000313|EMBL:AES89597.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00216 | 94932 | 99164 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000216s00014142.1 | PF09184.6 | PPP4R2 | 51 | 162 | 1.60E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 35.253 |
| SRR1783600 | control | 35.365 |
| SRR1783602 | moderate drought stress | 44.620 |
| SRR1811619 | moderate drought stress | 44.300 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 36.504 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 36.544 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 59.616 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 57.962 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 36.736 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 36.941 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.245 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.434 |
| SRR2868004 | Drought Stress (root) | 18.293 |
| SRR2967015 | Control (root) | 20.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.025 |
| SRR9715740 | Leaf | 16.429 |
| SRR9715741 | Leaf | 17.725 |
| SRR9715739 | Root | 12.391 |
| SRR9715742 | Root | 20.393 |
| SRR9715743 | Root | 14.607 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 31.766 |
| SRR8749028 | MeJA induced 9h | 27.770 |
| SRR8749029 | MeJA induced 9h | 24.898 |
| SRR8749030 | Uninduced | 13.377 |
| SRR8749031 | Uninduced | 6.072 |
| SRR8749032 | Uninduced | 7.893 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.848 |
| SRR8400027 | Control - Root | 33.233 |