Gene detail information of Glyur000214s00016032 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G19190.1 | 3.00E-16 | |
| NR | KHN37584.1 | 1.03E-61 | hypothetical protein glysoja_007287 [Glycine soja] |
| trEMBL | tr|K7M0W4|K7M0W4_SOYBN | 4.00E-62 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G27725.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00214 | 186875 | 187966 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.218 |
| SRR1783600 | control | 5.364 |
| SRR1783602 | moderate drought stress | 21.295 |
| SRR1811619 | moderate drought stress | 20.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.678 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.448 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.886 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.048 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.330 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.768 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.781 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.204 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.610 |
| SRR2868004 | Drought Stress (root) | 9.876 |
| SRR2967015 | Control (root) | 12.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 100.146 |
| SRR9715740 | Leaf | 122.638 |
| SRR9715741 | Leaf | 83.729 |
| SRR9715739 | Root | 3.007 |
| SRR9715742 | Root | 13.787 |
| SRR9715743 | Root | 10.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.242 |
| SRR8749028 | MeJA induced 9h | 1.170 |
| SRR8749029 | MeJA induced 9h | 0.208 |
| SRR8749030 | Uninduced | 2.339 |
| SRR8749031 | Uninduced | 0.228 |
| SRR8749032 | Uninduced | 0.793 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.397 |
| SRR8400027 | Control - Root | 9.499 |