Gene detail information of Glyur000214s00016028 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G19151.1 | 5.00E-10 | |
| NR | KHN37581.1 | 8.93E-27 | hypothetical protein glysoja_007284 [Glycine soja] |
| trEMBL | tr|K7M0W7|K7M0W7_SOYBN | 1.00E-26 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G27761.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00214 | 173164 | 173376 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.260 |
| SRR1783600 | control | 17.828 |
| SRR1783602 | moderate drought stress | 22.100 |
| SRR1811619 | moderate drought stress | 21.675 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 38.143 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 39.834 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 45.030 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 39.582 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 42.532 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 42.869 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.061 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.968 |
| SRR2868004 | Drought Stress (root) | 22.791 |
| SRR2967015 | Control (root) | 26.765 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.060 |
| SRR9715740 | Leaf | 22.525 |
| SRR9715741 | Leaf | 18.946 |
| SRR9715739 | Root | 19.557 |
| SRR9715742 | Root | 15.302 |
| SRR9715743 | Root | 17.907 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.482 |
| SRR8749028 | MeJA induced 9h | 4.521 |
| SRR8749029 | MeJA induced 9h | 1.415 |
| SRR8749030 | Uninduced | 1.992 |
| SRR8749031 | Uninduced | 0.541 |
| SRR8749032 | Uninduced | 1.954 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.380 |
| SRR8400027 | Control - Root | 31.113 |