Gene detail

Database	Orthologs	E value	Annotation
TAIR	AT1G54830.3	1.00E-42	nuclear factor Y, subunit C3
NR	AFK49679.1	9.49E-58	nuclear transcription factor Y subunit C10 [Medicago truncatula]
Swissprot	tr\|Q9ZVL3\|NFYC3_ARATH	3.00E-52	Nuclear transcription factor Y subunit C-3
trEMBL	tr\|I3TAY7\|I3TAY7_MEDTR	4.00E-58	Nuclear transcription factor Y subunit C10 {ECO:0000313\|EMBL:AFK49679.1}

Transcript Sequence

Protein Sequence

Scaffold	Start	End	Strand
Scaffold00214	167084	167920	+

Gene family	subfamily
Transcription Factors Family	NF-YC

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

biological_process
GO:0006355 regulation of transcription, DNA-templated

cellular_component

GO:0005622 intracellular

GO:0016602 CCAAT-binding factor complex

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

GO:0046982 protein heterodimerization activity

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000214s00016027.1	PF00808.18	CBFD_NFYB_HMF	97	159	2.10E-22

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.419
DRR006520	Root Summer glycyrrhizin high producing strain	2.089
DRR006521	Root Winter glycyrrhizin high producing strain	0.400
DRR006522	Root Winter glycyrrhizin high producing strain	0.260
DRR006523	Root Summer glycyrrhizin low producing strain	1.452
DRR006524	Root Summer glycyrrhizin low producing strain	1.401
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.242
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.843

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.663
SRR8400027	Control - Root	0.567