Gene detail

Gene detail information of Glyur000214s00016021

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G03220.1	9.00E-42	Eukaryotic aspartyl protease family protein
NR	XP_004486143.1	2.79E-166	PREDICTED: basic 7S globulin-like [Cicer arietinum]
Swissprot	tr\|Q8RVH5\|7SBG2_SOYBN	2.00E-32	Basic 7S globulin 2 low kDa subunit (Precursor)
trEMBL	tr\|A0A072V4P8\|A0A072V4P8_MEDTR	4.00E-166	Extracellular dermal glycoprotein {ECO:0000313\|EMBL:KEH36787.1}

Sequence

Transcript Sequence

>Glyur000214s00016021.1
ATGCCCCTGCCACCTTGCTATCGCTACTATAAAAGGGAGACTCTACCCTCTCAACTAAACACACCATCAACAACAAACACCATTGCCTCAAAATTAAAAGTTCACAACAATGTCTTCTCCTTCTTCCACCCATCTCTTCCTCCTCTCTCTCTAGCCCTTTTCTCTTCTTGCTGCTTTTCAGCATCACACCCTTTTATCCTTCCCATCAAGAAAGACCAAGCAACAAACCTCTTCTATACCTCAGTTGGCATAGGAACCCCTCGACACAACTTCAACCTTGCCATTGATCTTGGAGGAGACAACCTCTGGTACGACTGCGACACCAACTACAACTCATCATCTTACAGCCCCATCGAGTGTGGCTCAAAGAGATGCCCTGAAATTGGATGCATTGGCTGCAATGGCCCCTTCAAACCGGGTTGCACAAACAACACTTGCCTTGCTAATGCATTAAACACATTGGCCAAATTCATCTTTAGTGGTGAACTTGGTGAGGATCTCATCTTCATTTNACAACAGAAAGTCCCTGGCTTGCTCACTAGCTGCATTGACACTGATAGGCACCCATCATTCACCGGTGAGGACTCACTACTAAATGGGTTACCCAAAAGCAGCAAAGGGATAATTGGCCTTGCAAGGTCACAACTTTCACTACCAAATCAGCTTGCNTTGGCAAATAAGCTTCCACCCAAGTTTTCTCTCTGTTTGCCATCTTCAAATAAGCAAGGATTCACCAATTTGCTTGTTGGGGCTGGGGGAGATCCTCACCAGGAACTTTACAAATTTGTCCAAACCACACCATTGATTGTTAACCCAGTTGCCACAGAACCANTTTCTGTGCAGGGTGNTGCTTCCAAGGAATATTTCATTGATGTGAANTCNGTTAAGATNGATGNCAATGTTNTGAACTTGAAGCCTTCNTTNTTGTCNATTGACAATAAGGGAAATGGGGGNACCANAATCAGCACCATNAGTAATTTCACNGANTTACAAAGCTCTGTATACAAGCCCTTTATTAGGGAATTCCTCAAGAAGGCTTCGGATAGAAGAGTTAAAAGAGTGGCATCAGTGCCACCATTTGAGGCATGTTATGACTTAAGCTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00214	138404	139507	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004190 aspartic-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000214s00016021.1	PF14543.1	TAXi_N	78	247	3.70E-37
Glyur000214s00016021.1	PF14541.1	TAXi_C	287	366	1.70E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.050
SRR1783600	control	0.116
SRR1783602	moderate drought stress	0.120
SRR1811619	moderate drought stress	0.086

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.147
DRR006520	Root Summer glycyrrhizin high producing strain	0.097
DRR006521	Root Winter glycyrrhizin high producing strain	0.101
DRR006522	Root Winter glycyrrhizin high producing strain	0.246
DRR006523	Root Summer glycyrrhizin low producing strain	0.778
DRR006524	Root Summer glycyrrhizin low producing strain	1.100
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.126
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.084

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.199
SRR2868004	Drought Stress (root)	3.469
SRR2967015	Control (root)	2.438

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.489
SRR9715740	Leaf	0.368
SRR9715741	Leaf	2.099
SRR9715739	Root	0.854
SRR9715742	Root	1.884
SRR9715743	Root	1.592

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	22.136
SRR8749028	MeJA induced 9h	28.541
SRR8749029	MeJA induced 9h	20.156
SRR8749030	Uninduced	119.389
SRR8749031	Uninduced	180.994
SRR8749032	Uninduced	124.867

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.337
SRR8400027	Control - Root	1.074