Gene detail information of Glyur000214s00016002 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G06145.1 | 8.00E-36 | |
| NR | XP_007147771.1 | 1.52E-93 | hypothetical protein PHAVU_006G153800g [Phaseolus vulgaris] |
| trEMBL | tr|V7BRU5|V7BRU5_PHAVU | 6.00E-94 | Uncharacterized protein {ECO:0000313|EMBL:ESW19765.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00214 | 50712 | 51191 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.647 |
| SRR1783600 | control | 1.757 |
| SRR1783602 | moderate drought stress | 1.490 |
| SRR1811619 | moderate drought stress | 1.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.445 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.322 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.159 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.429 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.302 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.965 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.948 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.680 |
| SRR2868004 | Drought Stress (root) | 21.289 |
| SRR2967015 | Control (root) | 16.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.158 |
| SRR9715740 | Leaf | 1.745 |
| SRR9715741 | Leaf | 2.210 |
| SRR9715739 | Root | 7.342 |
| SRR9715742 | Root | 7.591 |
| SRR9715743 | Root | 5.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.388 |
| SRR8749028 | MeJA induced 9h | 1.008 |
| SRR8749029 | MeJA induced 9h | 0.811 |
| SRR8749030 | Uninduced | 0.159 |
| SRR8749031 | Uninduced | 0.080 |
| SRR8749032 | Uninduced | 0.205 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.354 |
| SRR8400027 | Control - Root | 34.147 |