Gene detail information of Glyur000214s00015999 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G19070.1 | 6.00E-09 | SNARE associated Golgi protein family |
| NR | XP_004486152.1 | 6.12E-23 | PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Cicer arietinum] |
| trEMBL | tr|V4RGI8|V4RGI8_9ROSI | 5.00E-23 | Uncharacterized protein {ECO:0000313|EMBL:ESR33053.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00214 | 39864 | 40733 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.834 |
| SRR1783600 | control | 16.946 |
| SRR1783602 | moderate drought stress | 13.097 |
| SRR1811619 | moderate drought stress | 12.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.701 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.362 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.611 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.639 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.325 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.304 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.939 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.875 |
| SRR2868004 | Drought Stress (root) | 9.827 |
| SRR2967015 | Control (root) | 9.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.549 |
| SRR9715740 | Leaf | 2.019 |
| SRR9715741 | Leaf | 2.620 |
| SRR9715739 | Root | 0.815 |
| SRR9715742 | Root | 2.395 |
| SRR9715743 | Root | 3.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.786 |
| SRR8749028 | MeJA induced 9h | 1.834 |
| SRR8749029 | MeJA induced 9h | 2.485 |
| SRR8749030 | Uninduced | 1.299 |
| SRR8749031 | Uninduced | 0.732 |
| SRR8749032 | Uninduced | 7.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.509 |
| SRR8400027 | Control - Root | 4.221 |