Gene detail information of Glyur000214s00015995.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G19040.11.00E-92isopentenyltransferase 5
NRXP_004486153.12.95E-176PREDICTED: adenylate isopentenyltransferase 5, chloroplastic-like [Cicer arietinum]
COGNP_622977.17.00E-26tRNA delta(2)-isopentenylpyrophosphate transferase [Thermoanaerobacter tengcongensis MB4]
Swissprottr|Q94ID2|IPT5_ARATH2.00E-113Adenylate isopentenyltransferase 5, chloroplastic (Precursor)
trEMBLtr|A0A072V515|A0A072V515_MEDTR1.00E-174Adenylate isopentenyltransferase {ECO:0000313|EMBL:KEH36761.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold0021483979798-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K10760IPTEC:2.5.1.27 2.5.1.112Zeatin biosynthesismap00908


Gene Ontology

biological_process

GO:0008033  tRNA processing



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000214s00015995.1PF01715.12IPPT691471.40E-18
Glyur000214s00015995.1PF01715.12IPPT1482533.10E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.013
SRR1783600control3.897
SRR1783602moderate drought stress10.921
SRR1811619moderate drought stress10.950

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.442
DRR006520Root Summer glycyrrhizin high producing strain12.506
DRR006521Root Winter glycyrrhizin high producing strain1.703
DRR006522Root Winter glycyrrhizin high producing strain1.737
DRR006523Root Summer glycyrrhizin low producing strain7.609
DRR006524Root Summer glycyrrhizin low producing strain7.520
DRR006525Leaf Summer glycyrrhizin high producing strain0.874
DRR006526Leaf Summer glycyrrhizin high producing strain0.990

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)7.324
SRR2868004Drought Stress (root)12.824
SRR2967015Control (root)14.783

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf1.022
SRR9715740Leaf0.183
SRR9715741Leaf0.608
SRR9715739Root15.936
SRR9715742Root16.911
SRR9715743Root16.345

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.896
SRR8749028MeJA induced 9h25.833
SRR8749029MeJA induced 9h3.534
SRR8749030Uninduced3.665
SRR8749031Uninduced0.513
SRR8749032Uninduced1.973

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root2.056
SRR8400027Control - Root3.439

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved