Gene detail information of Glyur000213s00016087 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42610.1 | 4.00E-78 | Protein of unknown function (DUF607) |
| NR | XP_004499124.1 | 0 | PREDICTED: uncharacterized protein LOC101502139 [Cicer arietinum] |
| Swissprot | tr|O64823|MCU2_ARATH | 2.00E-98 | Calcium uniporter protein 2, mitochondrial (Precursor) |
| trEMBL | tr|A0A072VDJ2|A0A072VDJ2_MEDTR | 0 | PPR containing plant-like protein {ECO:0000313|EMBL:KEH40094.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00213 | 62211 | 65334 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000213s00016087.1 | PF04678.8 | DUF607 | 169 | 332 | 4.20E-50 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.060 |
| SRR1783600 | control | 0.060 |
| SRR1783602 | moderate drought stress | 0.413 |
| SRR1811619 | moderate drought stress | 0.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.101 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.176 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.359 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.363 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.053 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.593 |
| SRR2868004 | Drought Stress (root) | 22.669 |
| SRR2967015 | Control (root) | 31.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.214 |
| SRR9715740 | Leaf | 1.213 |
| SRR9715741 | Leaf | 1.029 |
| SRR9715739 | Root | 0.122 |
| SRR9715742 | Root | 0.392 |
| SRR9715743 | Root | 0.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.034 |
| SRR8749028 | MeJA induced 9h | 0.900 |
| SRR8749029 | MeJA induced 9h | 4.241 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.163 |
| SRR8749032 | Uninduced | 0.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.210 |
| SRR8400027 | Control - Root | 6.253 |