Gene detail

Gene detail information of Glyur000213s00016084

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G19340.1	9.00E-120	Methyltransferase MT-A70 family protein
NR	XP_004499129.1	0	PREDICTED: methyltransferase-like protein 2-like isoform X1 [Cicer arietinum]
COG	YP_847988.1	1.00E-09	MT-A70 family protein [Syntrophobacter fumaroxidans MPOB]
Swissprot	tr\|Q8LFA9\|METL2_ARATH	2.00E-154	Methyltransferase-like protein 2
trEMBL	tr\|A0A072VF70\|A0A072VF70_MEDTR	0	Methyltransferase-like protein {ECO:0000313\|EMBL:KEH40098.1}

Sequence

Transcript Sequence

>Glyur000213s00016084.1
GGAAAGCTGGTGCGCTACGCTACTGTTTGCACTGGGGCAGCAACGAGCATGAAGTTGTGATGTGAATGGGAGGATTGGGAGGGGCATGAATGGAGGACTCACAAAAGCTGGCATTGTTCTACGAATCCGGTATATACAACTTCGATGATTCGAATGCCGTTTTCGTGGATCCCGTTCGCGTTCTCAACCGTTCCTACAACCGCTTCAGGGTTTCTCCATCTACCTACTATCCTCGCTTCTTCCATTCCCGAACCCCCAACCCTGTCCCCACCGTTACTTCCTCCCCCANAAAACGGAAACGGAAACGAAAANGGAGTCCGAAACAACCTCAACCTCTCAACGACAGAGAACGAATTGCACTGCAGCGTCATCAGGAAGTGAGGCCTTTGTTGTTGAGGGCACACGAGTGTTTGGTAAAATCAAGTGAGCTTTTGGATGCTTTGGGCACTTTGAGAAGTGAATCGAGTTGCTCCAAGGGGGAGTGTCAGGGTTGTCAACAATCTNTCATTGAATTGGGACGGCTTGTTCCTGATCTTGAGGTAACGCTAAATTTACGTCTTCGTGACCCTCACCACACGCAAAATGACTCAGAAGATTCCCCAAGTGTGCAATGCTGTGAGCAGAGGGTGCTTCCTGCATTCAATAATTTGGTTGATAATGACACTGAGGATGACGCGGTGGCTGAAATTTCGAACAACCGTTATATAATGCCTCGAGAGAGTTCCTTTTACATGTCTGATCTGGGACAGATTCGCAATTTAATTCCTGCTCATGCTAATTTTGGTTTCAACCTCATAATGGTGGATCCACCTTGGGAAAATGCTAGTGCCCACCAGAAATCAAGGTACCCTACCTTGCCTAATAGGTACTTTTTATCCCTTCCTATTAAGCAACTTACTCACACTGAAGGTGCCCTTGTAGCCTTATGGGTGACCAACAGAGAGAAGCTACGTAGTTTTGTTGANAAAGAGCTTTTTACTGCGTGGGGGGTCAGCTATGCTGCTAGTTTTTATTGGTTAAAGGTGAAAGCAAATGGATCCTTGATTGGAGATTTAGATCTCTTCCATCATAGGCCTTATGAGTGCCTTATCTTGGGATACAGTCCTGGGAAGGTAAAAGATTCTGATAACCAATCAAAATTTAAACCTGTGAAGGATGATCATGTGATTATGNGCATTCCTGGAGATTACTCAAGGAAACCCCCAATTGCAGATTTATTACTGGAGTACGTTCCCGGCCCCAAGCCTCCCAGATGTATTGAGCTATTTGCTAGGGAAATTATTGCTGGATGTGTTGCTTGGGGAAATGAACCACTTCACTTTCAAGATTCTAGATATTTTGTCNAAAAGATAGATAGCTAGGACTCTGAATTTTCAGCGTCTATTTTTATCTCTGTCCCCCNCTTTTTCACCTTGCACGGGTAATGTTGATTTCTTCTGGCTGCCAACAATTTCAAGTAAGAAGCAAAGATATAACTGATGCTATGCTTCTACTGGGAGAGTTGCTTTGTAAGGNTCTGTTTGGTTCAAAGAAGGGGAGGGGAGGATTAGATATTGTGTTTGGTTGNGAGGAGGGGAGAGGAGGAATTTTAATGGAGGGAATAAACTAATTTACTTTTTAGACCCTTGTGAGTTTTTATGTTTGATTTAATGTAANGTTATTTAANTAAATGTCATTAAAATATTTAAAGGCTTTTTCTCCCCCAATATTAGAGGGGAGCCAAATCTCTTCCCTCCCTTCCCCTCTCTAAAAAAATGAATGAAACAAGGAAGATTTAAAATATTTCCCTCNTCCNTTTCNCTCCAACCAAACACTATTGTTAAGTTATGGTGGGGAAAAGGAAAGTTGCTCGTTTCTGAGATATGTTGTGCTTATTTTCCATTAAGGCATAAAGGAAAGCTGGATGGGTTTGATTTTGTTCAATTGTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00213	11785	16134	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006139 nucleobase-containing compound metabolic process

molecular_function
GO:0008168 methyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000213s00016084.1	PF05063.9	MT-A70	233	407	8.00E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	23.042
SRR1783600	control	23.090
SRR1783602	moderate drought stress	42.385
SRR1811619	moderate drought stress	41.855

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	18.967
DRR006520	Root Summer glycyrrhizin high producing strain	18.698
DRR006521	Root Winter glycyrrhizin high producing strain	15.128
DRR006522	Root Winter glycyrrhizin high producing strain	14.852
DRR006523	Root Summer glycyrrhizin low producing strain	22.838
DRR006524	Root Summer glycyrrhizin low producing strain	22.561
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.029
DRR006526	Leaf Summer glycyrrhizin high producing strain	12.107

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	26.422
SRR2868004	Drought Stress (root)	30.002
SRR2967015	Control (root)	30.661

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.222
SRR9715740	Leaf	13.520
SRR9715741	Leaf	8.868
SRR9715739	Root	5.288
SRR9715742	Root	7.397
SRR9715743	Root	8.116

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	29.617
SRR8749028	MeJA induced 9h	30.278
SRR8749029	MeJA induced 9h	17.790
SRR8749030	Uninduced	10.947
SRR8749031	Uninduced	4.194
SRR8749032	Uninduced	12.479

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	41.800
SRR8400027	Control - Root	49.592