Gene detail information of Glyur000212s00017536 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G49750.1 | 3.00E-80 | receptor like protein 44 |
| NR | XP_004511805.1 | 7.40E-170 | PREDICTED: probable inactive receptor kinase At1g27190-like [Cicer arietinum] |
| COG | YP_004735589.1 | 7.00E-17 | Receptor-like protein kinase [Zobellia galactanivorans] |
| Swissprot | tr|Q9ASS4|Y5838_ARATH | 1.00E-28 | Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (Precursor) |
| trEMBL | tr|I1J9G9|I1J9G9_SOYBN | 1.00E-167 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G40390.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00212 | 234586 | 235419 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000212s00017536.1 | PF13855.1 | LRR_8 | 81 | 138 | 7.50E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 70.524 |
| SRR1783600 | control | 70.888 |
| SRR1783602 | moderate drought stress | 81.542 |
| SRR1811619 | moderate drought stress | 81.856 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 90.858 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 86.386 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.502 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.856 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 95.603 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 102.204 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.347 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 60.226 |
| SRR2868004 | Drought Stress (root) | 50.870 |
| SRR2967015 | Control (root) | 60.765 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.138 |
| SRR9715740 | Leaf | 6.107 |
| SRR9715741 | Leaf | 8.332 |
| SRR9715739 | Root | 63.435 |
| SRR9715742 | Root | 52.099 |
| SRR9715743 | Root | 44.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 45.413 |
| SRR8749028 | MeJA induced 9h | 28.977 |
| SRR8749029 | MeJA induced 9h | 22.227 |
| SRR8749030 | Uninduced | 11.124 |
| SRR8749031 | Uninduced | 0.573 |
| SRR8749032 | Uninduced | 2.549 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.727 |
| SRR8400027 | Control - Root | 56.394 |