Gene detail

Database	Orthologs	E value	Annotation
TAIR	AT5G65730.1	3.00E-126	xyloglucan endotransglucosylase/hydrolase 6
NR	XP_003539234.1	0	PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 6-like [Glycine max]
COG	YP_004642276.1	2.00E-12	protein GluB [Paenibacillus mucilaginosus KNP414]
Swissprot	tr\|Q8LF99\|XTH6_ARATH	1.00E-158	Probable xyloglucan endotransglucosylase/hydrolase protein 6 (Precursor)
trEMBL	tr\|I1LH32\|I1LH32_SOYBN	0	Xyloglucan endotransglucosylase/hydrolase {ECO:0000256\|RuleBase:RU361120}

Transcript Sequence

Protein Sequence

Scaffold	Start	End	Strand
Scaffold00212	133000	134239	+

Gene family	subfamily
Carbohydrate-Active enzymes Family	GH16

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

biological_process

GO:0005975 carbohydrate metabolic process

GO:0006073 cellular glucan metabolic process

cellular_component

molecular_function

GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds

GO:0016762 xyloglucan:xyloglucosyl transferase activity

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000212s00017523.1	PF00722.16	Glyco_hydro_16	34	207	2.40E-53
Glyur000212s00017523.1	PF06955.7	XET_C	230	280	4.50E-18

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.949
DRR006520	Root Summer glycyrrhizin high producing strain	5.123
DRR006521	Root Winter glycyrrhizin high producing strain	0.129
DRR006522	Root Winter glycyrrhizin high producing strain	0.126
DRR006523	Root Summer glycyrrhizin low producing strain	10.615
DRR006524	Root Summer glycyrrhizin low producing strain	9.713
DRR006525	Leaf Summer glycyrrhizin high producing strain	28.591
DRR006526	Leaf Summer glycyrrhizin high producing strain	29.328

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	28.479
SRR8400027	Control - Root	44.874