Gene detail information of Glyur000212s00017516 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G67020.1 | 8.00E-35 | |
| NR | XP_007156679.1 | 3.72E-137 | hypothetical protein PHAVU_002G008100g [Phaseolus vulgaris] |
| trEMBL | tr|V7CH68|V7CH68_PHAVU | 1.00E-137 | Uncharacterized protein {ECO:0000313|EMBL:ESW28673.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00212 | 110422 | 111462 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.979 |
| SRR1783600 | control | 2.756 |
| SRR1783602 | moderate drought stress | 1.856 |
| SRR1811619 | moderate drought stress | 1.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.307 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.652 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.144 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.247 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.281 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.156 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.863 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.741 |
| SRR2868004 | Drought Stress (root) | 2.480 |
| SRR2967015 | Control (root) | 3.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.162 |
| SRR9715740 | Leaf | 2.023 |
| SRR9715741 | Leaf | 4.075 |
| SRR9715739 | Root | 57.241 |
| SRR9715742 | Root | 19.825 |
| SRR9715743 | Root | 28.773 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.557 |
| SRR8749028 | MeJA induced 9h | 4.556 |
| SRR8749029 | MeJA induced 9h | 2.365 |
| SRR8749030 | Uninduced | 0.495 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.817 |
| SRR8400027 | Control - Root | 5.774 |