Gene detail information of Glyur000212s00017504 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G35260.1 | 3.00E-100 | |
| NR | XP_004511788.1 | 0 | PREDICTED: uncharacterized protein LOC101505622 [Cicer arietinum] |
| trEMBL | tr|C6TCG1|C6TCG1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G04660.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00212 | 3537 | 7458 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000212s00017504.1 | PF02517.11 | Abi | 187 | 316 | 2.70E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.221 |
| SRR1783600 | control | 5.125 |
| SRR1783602 | moderate drought stress | 6.053 |
| SRR1811619 | moderate drought stress | 5.953 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.591 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.812 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 28.745 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 29.014 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.275 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.720 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 198.465 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 196.646 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.726 |
| SRR2868004 | Drought Stress (root) | 48.310 |
| SRR2967015 | Control (root) | 43.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 167.865 |
| SRR9715740 | Leaf | 211.691 |
| SRR9715741 | Leaf | 193.934 |
| SRR9715739 | Root | 5.239 |
| SRR9715742 | Root | 12.658 |
| SRR9715743 | Root | 11.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 44.992 |
| SRR8749028 | MeJA induced 9h | 54.619 |
| SRR8749029 | MeJA induced 9h | 56.759 |
| SRR8749030 | Uninduced | 67.877 |
| SRR8749031 | Uninduced | 67.561 |
| SRR8749032 | Uninduced | 75.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.617 |
| SRR8400027 | Control - Root | 20.297 |