Gene detail information of Glyur000211s00017655 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G27810.1 | 3.00E-13 | |
| NR | AFK38837.1 | 5.26E-71 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9M160|Y4095_ARATH | 1.00E-14 | Uncharacterized protein At4g00950 |
| trEMBL | tr|I3SEZ5|I3SEZ5_LOTJA | 2.00E-71 | Uncharacterized protein {ECO:0000313|EMBL:AFK38837.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00211 | 170001 | 171639 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000211s00017655.1 | PF05097.7 | DUF688 | 38 | 85 | 0.00015 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.555 |
| SRR1783600 | control | 0.467 |
| SRR1783602 | moderate drought stress | 0.699 |
| SRR1811619 | moderate drought stress | 0.893 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.171 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.227 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.116 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.120 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.395 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.769 |
| SRR2868004 | Drought Stress (root) | 3.177 |
| SRR2967015 | Control (root) | 2.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.779 |
| SRR9715740 | Leaf | 13.133 |
| SRR9715741 | Leaf | 9.577 |
| SRR9715739 | Root | 0.837 |
| SRR9715742 | Root | 0.456 |
| SRR9715743 | Root | 1.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.075 |
| SRR8749028 | MeJA induced 9h | 0.175 |
| SRR8749029 | MeJA induced 9h | 0.246 |
| SRR8749030 | Uninduced | 0.426 |
| SRR8749031 | Uninduced | 0.489 |
| SRR8749032 | Uninduced | 0.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.059 |
| SRR8400027 | Control - Root | 0.798 |