Gene detail information of Glyur000211s00017654 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46550.1 | 6.00E-56 | |
| NR | KHN15921.1 | 4.21E-180 | hypothetical protein glysoja_013137 [Glycine soja] |
| trEMBL | tr|I1KHU2|I1KHU2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G06040.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00211 | 166243 | 169716 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.608 |
| SRR1783600 | control | 1.581 |
| SRR1783602 | moderate drought stress | 0.805 |
| SRR1811619 | moderate drought stress | 0.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.261 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.223 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.649 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.562 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.079 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.082 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.993 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.958 |
| SRR2868004 | Drought Stress (root) | 3.093 |
| SRR2967015 | Control (root) | 2.956 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.747 |
| SRR9715740 | Leaf | 8.057 |
| SRR9715741 | Leaf | 1.808 |
| SRR9715739 | Root | 0.672 |
| SRR9715742 | Root | 1.616 |
| SRR9715743 | Root | 1.640 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.690 |
| SRR8749028 | MeJA induced 9h | 20.076 |
| SRR8749029 | MeJA induced 9h | 20.843 |
| SRR8749030 | Uninduced | 12.703 |
| SRR8749031 | Uninduced | 23.827 |
| SRR8749032 | Uninduced | 9.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.988 |
| SRR8400027 | Control - Root | 5.882 |