Gene detail information of Glyur000211s00017642 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42000.1 | 2.00E-77 | ORMDL family protein |
| NR | XP_007135277.1 | 2.93E-109 | hypothetical protein PHAVU_010G115700g [Phaseolus vulgaris] |
| trEMBL | tr|V7AST0|V7AST0_PHAVU | 1.00E-109 | Uncharacterized protein {ECO:0000313|EMBL:ESW07271.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00211 | 93655 | 97348 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000211s00017642.1 | PF04061.9 | ORMDL | 15 | 149 | 1.10E-51 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 96.748 |
| SRR1783600 | control | 96.097 |
| SRR1783602 | moderate drought stress | 101.660 |
| SRR1811619 | moderate drought stress | 100.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 117.172 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 111.527 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 289.853 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 283.939 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 111.313 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 111.403 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 79.327 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 78.748 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 73.106 |
| SRR2868004 | Drought Stress (root) | 64.644 |
| SRR2967015 | Control (root) | 76.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.818 |
| SRR9715740 | Leaf | 27.440 |
| SRR9715741 | Leaf | 30.300 |
| SRR9715739 | Root | 62.112 |
| SRR9715742 | Root | 39.491 |
| SRR9715743 | Root | 42.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 74.173 |
| SRR8749028 | MeJA induced 9h | 45.997 |
| SRR8749029 | MeJA induced 9h | 71.341 |
| SRR8749030 | Uninduced | 43.542 |
| SRR8749031 | Uninduced | 52.523 |
| SRR8749032 | Uninduced | 57.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 93.795 |
| SRR8400027 | Control - Root | 88.642 |