Gene detail

Gene detail information of Glyur000211s00017641.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G18750.3	2.00E-151	with no lysine (K) kinase 6
NR	XP_004510644.1	0	PREDICTED: serine/threonine-protein kinase WNK8-like isoform X1 [Cicer arietinum]
COG	YP_003797667.1	1.00E-19	putative serine/threonine protein kinase [Candidatus Nitrospira defluvii]
Swissprot	tr\|Q6EU49\|WNK4_ORYSJ	0	Probable serine/threonine-protein kinase WNK4
trEMBL	tr\|K7MES9\|K7MES9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA16G02531.2}

Sequence

Transcript Sequence

>Glyur000211s00017641.1
ATGTCTAGAATCAAGACAGAGCGAGTCAACAATTCAACTCCTTACAATGAAATCTTGGGTAGAGGTGCCTTCAAGACTGTCTATAGGGGCTTTGATGAAGTTAATGGAATAGAAGTTGCTTGGAACCAAGTTAAGATTGATGGTCTCTTGCATTCAGTAGATGATCTTGCAAAATTGTATTCNGAAGTTCATCTGTTGAAGTCTTTGAAACATGAAAATATCATTAAGTTCTATAATTCTTGGATTGATGATAAGCAGAAGACTGTCAACATAATCACTGAACTATTCACGTCTGGAAATTTAAGGCAGTATCGTAAGAAGCATAAATATGTTGAAATGAAAGCCATNAAAGGTTGGGCTAGGCAGATTCTTCAAGGTTTAGTATATCTTCACAGTCACAAGCCACCTATTATTCACAGAGACTTGAAATGTGATAACATTTTTGTGAATGGAAACCAAGGAGAGGTTAAGATAGGAGACCTTGGTTTAGCAATTGTCATGCAGCAGCCAACTGCTCGAAGTGTTATTGGGACACCTGAGTTTATGGCTCCAGAGTTATATGAAGAGGAATATAATGAACTTGTTGACATCTATTCTTTTGGGATGTGCATGTTGGAGATGGTTACTCTTGAGTATCCCTATAGTGAATGCAACAATCCAGCTCAAATCTTTAAGAAAGTTACCTCGGGCATCAAACCTGCTTCCCTTAATAAGGTGAGTGACCCCAAAATTAAGAAGTTTATTGAGAAATGTCTGGTTCCAGCATCTGAGAGATTGTCTGCAGAGGAGCTTCTTAAAGACCCATTTCTACAAGTTGAGAATCCAAAGGATCCAATGCTTTATCCTTTACAGTCACTTATTAAATCTCCAAGTACAGATATGTCCAAGTCTGGTTCTCTGTCTATGGATATAGATGCTGAATCCAAACAACTTTCTAGGAGTACCTGTGCTGAAAGCAACCAGGGAAGCCCACGTTGTCCTGTTTTTGAAGTCGAAAGGACTAATAAGAACAATGAGTTTAGGTTGAATGGGACTAAAAATGATGATAACTCGGTATCATTAACCTTGCGTATTGCCGATACATGTGGTCGAGTAAGGAATATACATTTTCTCTTTTACCTTGACACTGATACTGCAATCTCNGTGGCCTCAGAGATGGTTGAACATTTGGAACTAGCGGATCACGATGTGGCTTTCATAGCTGAGCTTATTGATTACTTGATAATGAAACTTCTACCTTGGTGGAAACCCTCTCCTGATCATAACTCAATTGGAGAAACATGTCTTTATGGTGGGTCATCAAATGTAGATGGCCAAACCTTAATGGCATGTCCATGGGGTTCTGTCCTAACTAGTATTCCNTCTAAATTAGTTAGTGGTCAAAATGGCTTCTCCGGGTTTAATGCAATTCCTAGGGAAGGTTTTGAGACAGCTGACAAGAGCTGTTTTTACAAAAATACTGATAATAATGCTACTTTTGAGGGTGATTATAACTCTTCTCCTAGTTTGGTTAACTTGGAATGTCGATATTCGCAAGGATCTCGAGCTTCTGAGATAGCTGTTGAAGATGCTTATAGGAAAAATGACAATTGTTGTGATACCAATGTNGACGAAAGTTTTAAATGCTTAAGTAGGTACATCTCGGAACTTGAACTCGGGGATGCATATTTTGAAGATTGTAAATTGCAGGCAACAGATTGTAGTGCTGGGGAAGACATTGTGATAAATGAAATCCCAAAGAACTCNGGGTCAAGTTGTGGAAGATCAAATGTTGTGAGCTTGTCAAGTAACTATTCTTATGTGTCTTCAACCGAAAAGGATATTGATCTTGAGCTAAAGCTTGAACTGGATGCAGTTGAGTCACAATATCAACATTGGATAGAAGAACTTACTAGAATGAAGTTGGAGGCATTAGAAGCCACCCGAAGGAGATGGATGGCCAAGAAGAAAGTAGTTATTCATTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00211	81644	84523	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.1.5.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000211s00017641.1	PF00069.20	Pkinase	16	270	1.60E-53

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.046
SRR1783600	control	0.027
SRR1783602	moderate drought stress	0.019
SRR1811619	moderate drought stress	0.019

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.082
DRR006520	Root Summer glycyrrhizin high producing strain	0.082
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.094
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.094

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.638
SRR2868004	Drought Stress (root)	0.452
SRR2967015	Control (root)	0.405

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.241
SRR9715740	Leaf	0.214
SRR9715741	Leaf	0.427
SRR9715739	Root	0.000
SRR9715742	Root	0.126
SRR9715743	Root	0.084

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.108
SRR8749028	MeJA induced 9h	0.213
SRR8749029	MeJA induced 9h	0.052
SRR8749030	Uninduced	0.055
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.389
SRR8400027	Control - Root	0.220