Gene detail information of Glyur000211s00017627 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46630.1 | 3.00E-14 | |
| NR | XP_007147341.1 | 1.58E-43 | hypothetical protein PHAVU_006G115800g [Phaseolus vulgaris] |
| trEMBL | tr|V7BQK4|V7BQK4_PHAVU | 6.00E-44 | Uncharacterized protein {ECO:0000313|EMBL:ESW19335.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00211 | 18949 | 19818 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 182.682 |
| SRR1783600 | control | 182.482 |
| SRR1783602 | moderate drought stress | 92.401 |
| SRR1811619 | moderate drought stress | 91.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.719 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.842 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.125 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 33.793 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.836 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.081 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.759 |
| SRR2868004 | Drought Stress (root) | 0.916 |
| SRR2967015 | Control (root) | 1.766 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.013 |
| SRR9715740 | Leaf | 1.661 |
| SRR9715741 | Leaf | 2.858 |
| SRR9715739 | Root | 13.936 |
| SRR9715742 | Root | 32.601 |
| SRR9715743 | Root | 26.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.241 |
| SRR8749028 | MeJA induced 9h | 0.456 |
| SRR8749029 | MeJA induced 9h | 0.070 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.176 |
| SRR8749032 | Uninduced | 0.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.420 |
| SRR8400027 | Control - Root | 6.107 |