Gene detail information of Glyur000210s00014467 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G35460.1 | 1.00E-07 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
| NR | KEH41906.1 | 7.16E-26 | transmembrane protein, putative [Medicago truncatula] |
| Swissprot | tr|Q9C615|SYP24_ARATH | 7.00E-06 | Putative syntaxin-24 |
| trEMBL | tr|A0A072VJZ3|A0A072VJZ3_MEDTR | 3.00E-26 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH41906.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00210 | 250483 | 250743 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.928 |
| SRR1783600 | control | 0.815 |
| SRR1783602 | moderate drought stress | 0.883 |
| SRR1811619 | moderate drought stress | 0.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.790 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.209 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.428 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.283 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.522 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.405 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 92.350 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 108.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.982 |
| SRR2868004 | Drought Stress (root) | 10.523 |
| SRR2967015 | Control (root) | 9.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 162.176 |
| SRR9715740 | Leaf | 127.374 |
| SRR9715741 | Leaf | 207.223 |
| SRR9715739 | Root | 4.961 |
| SRR9715742 | Root | 30.350 |
| SRR9715743 | Root | 20.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 53.834 |
| SRR8749028 | MeJA induced 9h | 68.994 |
| SRR8749029 | MeJA induced 9h | 27.845 |
| SRR8749030 | Uninduced | 136.084 |
| SRR8749031 | Uninduced | 24.716 |
| SRR8749032 | Uninduced | 33.767 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.246 |
| SRR8400027 | Control - Root | 9.302 |