Gene detail

Gene detail information of Glyur000210s00014462

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G14420.1	9.00E-37	HR-like lesion-inducing protein-related
NR	XP_004493765.1	1.26E-91	PREDICTED: uncharacterized protein LOC101511306 [Cicer arietinum]
trEMBL	tr\|I3S847\|I3S847_LOTJA	1.00E-89	Uncharacterized protein {ECO:0000313\|EMBL:AFK36439.1}

Sequence

Transcript Sequence

>Glyur000210s00014462.1
CCCTTTTCAGTCTTCGCTCCTCTCGTTTTCAATTTTCGCTTCGCTTGCGCCTTGCTCTCTCTTTGTTCTTGCTCTGACTGACAGGGAAAAGAAAAAACCACAACAAATTTCAGGGCACCCTAGATTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCTCTCCAATAACAATGGCCTTCGCTTCTTTCCTTGGCAGAGTCCTCTTCGCTTCCCTCTTCATCCTCTCTGCTTACCAAGAATTTAATGAATATGGAGTTGATGGGGGTCCTGCAGCAAAAGCAATCAGACCAAAGTTTGATGCCTTTACATNTAAAATACATTCTCAAGTTGGCTTTCAACTTCCACAAATTGATATGAAACTTTTAGTTGCTGGGGCTATTGCTCTCAAGGGCGTTGGAGGGATTCTTTTCATATNTGGCAGCTCTTTCGGAGCTTTCCTTTTGCTTCTGCATCAGATGATTGCCACTCCGATATTGTATGATTTCTATAATTACNAAAGCGAGGACAAAGAATTTATTCAACTTTTCATCAAATTTACACAGAATATGGCTCTCTCTGGGGCTTTGTTGTTTTTTATNGGGATGAAAAACTCCATTCCTAGAAGGCAACCCAAGAAGAAGGTTCCCAAAACAAAAACCTACTAGTAGCCGCAATTTAAAGACTCATTCTGCAAGGAGTTCTCGGGTTGTTTCCTGATTGATCATTATGCCCGCTCTCCATTTCCCCAGGATCTGGCTTGGGCGTTTGTCTGGTTCACTACAAATCTCCCCGCCTANCAGTATTGTCGGTGTAGCATCAGTCTCACATGGATTACACATAATTTTATGTATTTATACATATATATTGTTTTTTTGATTGACATTAGGAACTATCTTTCAATTGCTAAACTTGTCTACCAAGAGGGGTAAAAATGATTAGAGCCTGTTTGCTGAAACTTTTTTTTGGGTCCATTGTTTGCTCAAACTTAGAGAGTGCCGATTTCTTTCTGTCTAGAGAACTTGATGTTAAGGCCCTGAAAGTCTCGCACTTGAAGTTGCTTTTGTACTGCAATTAGATTAGATTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00210	210772	218662	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000210s00014462.1	PF05514.6	HR_lesion	1	138	3.00E-57

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	29.072
SRR1783600	control	28.660
SRR1783602	moderate drought stress	18.697
SRR1811619	moderate drought stress	18.597

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	28.847
DRR006520	Root Summer glycyrrhizin high producing strain	28.392
DRR006521	Root Winter glycyrrhizin high producing strain	32.109
DRR006522	Root Winter glycyrrhizin high producing strain	31.451
DRR006523	Root Summer glycyrrhizin low producing strain	24.298
DRR006524	Root Summer glycyrrhizin low producing strain	23.237
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.615
DRR006526	Leaf Summer glycyrrhizin high producing strain	12.553

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	77.242
SRR2868004	Drought Stress (root)	60.674
SRR2967015	Control (root)	52.525

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	14.373
SRR9715740	Leaf	10.025
SRR9715741	Leaf	12.425
SRR9715739	Root	27.818
SRR9715742	Root	25.394
SRR9715743	Root	23.688

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	69.779
SRR8749028	MeJA induced 9h	42.028
SRR8749029	MeJA induced 9h	47.571
SRR8749030	Uninduced	18.716
SRR8749031	Uninduced	16.184
SRR8749032	Uninduced	10.093

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	56.950
SRR8400027	Control - Root	52.769