Gene detail information of Glyur000210s00014453 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G58170.1 | 2.00E-43 | BET1P/SFT1P-like protein 14A |
| NR | XP_007050361.1 | 1.03E-63 | BET1P/SFT1P-like protein 14A isoform 1 [Theobroma cacao] |
| Swissprot | tr|Q9M2J9|BET11_ARATH | 2.00E-54 | Bet1-like SNARE 1-1 |
| trEMBL | tr|A0A061DWX7|A0A061DWX7_THECC | 4.00E-64 | BET1P/SFT1P-like protein 14A isoform 1 {ECO:0000313|EMBL:EOX94518.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00210 | 158747 | 162260 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000210s00014453.3 | PF05739.14 | SNARE | 68 | 126 | 1.60E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.781 |
| SRR1783600 | control | 18.220 |
| SRR1783602 | moderate drought stress | 21.035 |
| SRR1811619 | moderate drought stress | 19.878 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 41.256 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 40.302 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 69.573 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 66.205 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 30.521 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.204 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.865 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.416 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 32.390 |
| SRR2868004 | Drought Stress (root) | 31.856 |
| SRR2967015 | Control (root) | 30.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.152 |
| SRR9715740 | Leaf | 14.169 |
| SRR9715741 | Leaf | 16.860 |
| SRR9715739 | Root | 14.740 |
| SRR9715742 | Root | 7.900 |
| SRR9715743 | Root | 8.815 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 47.207 |
| SRR8749028 | MeJA induced 9h | 38.359 |
| SRR8749029 | MeJA induced 9h | 54.651 |
| SRR8749030 | Uninduced | 23.407 |
| SRR8749031 | Uninduced | 27.844 |
| SRR8749032 | Uninduced | 21.200 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.937 |
| SRR8400027 | Control - Root | 34.067 |