Gene detail information of Glyur000210s00014446 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004493758.1 | 2.12E-22 | PREDICTED: uncharacterized protein LOC101509060 [Cicer arietinum] |
| trEMBL | tr|C6TFW2|C6TFW2_SOYBN | 1.00E-19 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G31710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00210 | 125858 | 126055 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.184 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.814 |
| SRR1811619 | moderate drought stress | 0.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.543 |
| SRR2868004 | Drought Stress (root) | 22.473 |
| SRR2967015 | Control (root) | 11.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.141 |
| SRR9715740 | Leaf | 0.818 |
| SRR9715741 | Leaf | 0.621 |
| SRR9715739 | Root | 17.868 |
| SRR9715742 | Root | 9.506 |
| SRR9715743 | Root | 9.420 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 55.167 |
| SRR8749028 | MeJA induced 9h | 121.455 |
| SRR8749029 | MeJA induced 9h | 68.861 |
| SRR8749030 | Uninduced | 713.131 |
| SRR8749031 | Uninduced | 252.383 |
| SRR8749032 | Uninduced | 159.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.436 |
| SRR8400027 | Control - Root | 8.273 |