Gene detail

Gene detail information of Glyur000210s00014443

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G63450.1	1.00E-112	cytochrome P450, family 94, subfamily B, polypeptide 1
NR	XP_004493756.1	0	PREDICTED: cytochrome P450 94A1-like [Cicer arietinum]
COG	YP_004164863.1	1.00E-31	unspecific monooxygenase [Cellulophaga algicola DSM 14237]
Swissprot	tr\|O81117\|C94A1_VICSA	0	Cytochrome P450 94A1
trEMBL	tr\|A0A072U2H0\|A0A072U2H0_MEDTR	0	Cytochrome P450 family 94 protein {ECO:0000313\|EMBL:KEH23874.1}

Sequence

Transcript Sequence

>Glyur000210s00014443.1
ATGGTTTGGATCGAGATGCTTCCATATCTGTTACCTCTCTTCTTCATCCTTCCCCTGCTCTTCTTCTTCGTGTCCACAGGTTCGAAGAAGAAGAAAGAACAACACAGCAATAGCATTACCATCCCAAAATTATACCCACTGATCGGTTCCTACTTTTCAATCAGAGGCAACGCCAACCGCAGGATCCAATGGACCTCCGACATAGTCCAGATCGCACCCGCCGCCACCTTCCCCCTCCGCAAACACCAGGTCATCACCGGCAACCCCGCCACCGTGCAGCACATCCTCAAGACCCGTTTCTCCAACTACCAAAAAGGCACCGGCTTCACCGGTACCCTGTCAGATTTCCTNGGAAACGGAATCTTCAACACCGACGGCGACACGTGGAAGTTCCAGAGACAAGTCGCCAGCCACGAATTCAACACAAAGTCACTCCGCAAATTCGTCGAACACGTGGTCGACACCGAACTCTCCAACCGTCTCATCCCAATCCTCTCCTCAGCAGCAACTACCCAAGACAAGGTCCTCAATTTCCAAGACATCCTCCAACGTTTCGCGTTCGACAACATCTGCAAAATCGCGTTTGGGTTCGACCCAGAGTACCTGACTCAGAACACCACCGAGAAAAGCAAGTTCGTGGAAGCTTTCGAAGAAGCAAACGTGATAAGCAGCAAGAGGTTCCGCGTGCTACCCATTCTGTGGAAACTCAAGAGGAAGCTGAACATTGGGTCGGAGAAGCGACTCCGATTGGCGGTTGGGGAAGTGCGTGAATTCGCGAAGAGGATAGTGAGGGAGAAGAAGAAAGAGCTCGAGGAGAAGAAGACTTCGCTGGAAACAGAGGACATGCTTTCGCGGTTCTTGAGTTCGGGTCACTCGGAGGAGGAATTCGTGGCGGATATAGTGATAAGTTTTATATTGGCGGGGAAGGACACGACTTCGGCGGCGCTGACGTGGTTCTTCTGGTTGTTGTGGAAGAACCCGCGCGTGGAGGAAGAGATCGTGAAGGAGATAACGGAGATGGAGGAGAAGAATAAGTGTTCGGAGGGGGGTCACGTGTACGAGGAGGTGAAGAAGATGGTTTACACGCACGCGGCGCTGAGCGAGAGCATGAGGCTGTACCCTCCGGTTCCGATGGATAGCAAGGAGGCTGTGAACGACGACGTTTTGCCGGATGGGACGGTTGTTAAGAAGGGGGATGTGGTGACGTACCACGTGTACGCGATGGGGAGGATGGTGGGCCTTTGGGGGGCTGATTGGGCCGAGTTTAGGCCCGAGAGGTGGTTGGAGAGGGATGATGATGATGATAATAATGAGGGAGGGAAGTGGAGGTTTGTTGGGAGGGATTCGTTTTCGTATCCCGTGTTTCAGGCGGGTCCTAGGATTTGTTTGGGTAAGGAAATGGCGTTTTTGCAGATGAAGAGGTTGGTGGCTGGTGTTCTTAGCCAATTCAGGGTTGTGCCACAGCCACATTTGGATCAACACCCTAACTTCATTTCCTTCTTGGCTTCTCAAATGGAAGGTGGATTCCCCGTCACCATCCAACAAAGGCTTCCTTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00210	104649	106205	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP94B1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000210s00014443.1	PF00067.17	p450	77	499	1.60E-66

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.500
SRR1783600	control	1.358
SRR1783602	moderate drought stress	4.241
SRR1811619	moderate drought stress	4.276

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.659
DRR006520	Root Summer glycyrrhizin high producing strain	9.699
DRR006521	Root Winter glycyrrhizin high producing strain	4.960
DRR006522	Root Winter glycyrrhizin high producing strain	4.701
DRR006523	Root Summer glycyrrhizin low producing strain	29.006
DRR006524	Root Summer glycyrrhizin low producing strain	29.932
DRR006525	Leaf Summer glycyrrhizin high producing strain	47.773
DRR006526	Leaf Summer glycyrrhizin high producing strain	43.875

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	9.467
SRR2868004	Drought Stress (root)	99.387
SRR2967015	Control (root)	35.663

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	234.489
SRR9715740	Leaf	95.611
SRR9715741	Leaf	336.121
SRR9715739	Root	85.509
SRR9715742	Root	174.342
SRR9715743	Root	144.420

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	134.521
SRR8749028	MeJA induced 9h	292.866
SRR8749029	MeJA induced 9h	272.854
SRR8749030	Uninduced	302.206
SRR8749031	Uninduced	338.594
SRR8749032	Uninduced	118.539

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	12.041
SRR8400027	Control - Root	10.895