Gene detail information of Glyur000210s00014436 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G30580.1 | 8.00E-105 | DREB2A-interacting protein 2 |
| NR | XP_007162503.1 | 0 | hypothetical protein PHAVU_001G157400g [Phaseolus vulgaris] |
| Swissprot | tr|Q94AY3|DRIP2_ARATH | 9.00E-142 | E3 ubiquitin protein ligase DRIP2 |
| trEMBL | tr|V7CWD5|V7CWD5_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW34497.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00210 | 46113 | 52440 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.568 |
| SRR1783600 | control | 3.649 |
| SRR1783602 | moderate drought stress | 2.822 |
| SRR1811619 | moderate drought stress | 2.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.350 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.396 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.232 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.152 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.444 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.783 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.431 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.589 |
| SRR2868004 | Drought Stress (root) | 4.905 |
| SRR2967015 | Control (root) | 4.837 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.282 |
| SRR9715740 | Leaf | 5.752 |
| SRR9715741 | Leaf | 16.063 |
| SRR9715739 | Root | 5.313 |
| SRR9715742 | Root | 40.130 |
| SRR9715743 | Root | 34.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.641 |
| SRR8749028 | MeJA induced 9h | 4.664 |
| SRR8749029 | MeJA induced 9h | 5.103 |
| SRR8749030 | Uninduced | 3.081 |
| SRR8749031 | Uninduced | 2.598 |
| SRR8749032 | Uninduced | 2.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.376 |
| SRR8400027 | Control - Root | 7.095 |