Gene detail

Gene detail information of Glyur000210s00014435

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G64560.1	8.00E-117	magnesium transporter 9
NR	XP_003554279.1	0	PREDICTED: magnesium transporter MRS2-I-like isoform X1 [Glycine max]
Swissprot	tr\|B8AJT9\|MRS2I_ORYSI	3.00E-168	Magnesium transporter MRS2-I
trEMBL	tr\|I1N9N1\|I1N9N1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G34430.1}

Sequence

Transcript Sequence

>Glyur000210s00014435.1
ATGGCTCTTGCTGGGTCCACAGTGGAGCTTCAAGCTGCTACTTCTGTAAAGAAGAAAGGTGCAGTTTCAAGAAGCTGGATTTTGCTGAACAGTGATGGCAGAGGCACTGTCTTGGATGTGGACAAGTATGCTATTATGCGCCTGGTTGAAATTCACGCGAGAGATCTTCGAATTATGGACCCTCTCCTTTCTTATCCTTCCACCATTCTGGGCAGAGAGAAAGTCATTGTTCTAAATTTAGAGGCAAACACTCTGTTTCTGTTCAACCGCATAATAACCTGTTCTCACATCAAAGCTATTATCACTGCTGAAGAGGTGTTGCTTAGAGATCCAATGGATGATGACGTTGTGCCTATTGTTGAAGAACTTNGACGACGGTTACCCAAGGTGACTGCTGCTGGCCAAGGAGAAGAAGAGTCGTGTGCTCAAGATGGTGAAGGTGGAGAAGAAAACGAATTTCCATTTGAGTTCCGGGCCTTAGAAGTTGTGTTAGAGGCAATTTGTAGTTTCCTTGACGCACGGACAAGAGAGTTAGAGACTGCTGCTTATCCAGCTTTGGATGAACTAACCTCTAAGATCAGCAGTCGTAATTTGGATAGAGTGCGAAAATTGAAAAGTGCAATGACGAGGCTGACGAATCGAGTTCAAAAGATAAGAGATGAACTAGAAAACCTACTCGATGATGATGACGACATGGCTGATCTTTACTTATCAAGAAAGTTGGCCGTTTCATCCTCTGCCGCCGCAAGTAGCTCTGGTGCTCCCAGCTCGCTTCACAGCTCTCCAAATCCACGTTCAAAAACACACAGATCAAGAAGCAGAGCAAGTGCAACAACAATTCATGGAGAGAATGATGTTGAGGAGCTCGAGATGTTACTTGAGGCCTATTTCATGCAAATTGAGGGCACCTTAAATAAATTGACCACATTACGAGAATATATTGATGACACAGAAGATTACATCAACATACAGCTTGACAATCACCGAAATCAACTAATTCAGCTAGAGCTCTTTCTAAGTTCCGGGACTGTCTGTCTGTCCTTATATTCATTGGTGGCTGCAATATTTGGTATGAACATTCCATATACATGGAGAGAAGGTCATGGATATGTATTTAAATGGGTGGTGATCCTTACGGGAATGGCTTGTGCATCCNTTATCTTATGCCCGACGCAAAGGTCTTGTTGGGTCTTGAAATTAATGCATAAAGATATGCTTGTTTGGGAGACATCTCAGATTAAGTCAGAAGTGTACAGGAAGTGGAAATCCGAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00210	40496	43671	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0015693 magnesium ion transport

GO:0030001 metal ion transport

GO:0055085 transmembrane transport

cellular_component
GO:0016020 membrane

molecular_function

GO:0015095 magnesium ion transmembrane transporter activity

GO:0046873 metal ion transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000210s00014435.1	PF01544.13	CorA	291	384	2.20E-07

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	24.031
SRR1783600	control	24.030
SRR1783602	moderate drought stress	33.461
SRR1811619	moderate drought stress	32.793

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	26.629
DRR006520	Root Summer glycyrrhizin high producing strain	26.152
DRR006521	Root Winter glycyrrhizin high producing strain	14.302
DRR006522	Root Winter glycyrrhizin high producing strain	13.573
DRR006523	Root Summer glycyrrhizin low producing strain	23.297
DRR006524	Root Summer glycyrrhizin low producing strain	23.273
DRR006525	Leaf Summer glycyrrhizin high producing strain	55.639
DRR006526	Leaf Summer glycyrrhizin high producing strain	55.321

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	19.274
SRR2868004	Drought Stress (root)	32.327
SRR2967015	Control (root)	35.552

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	52.832
SRR9715740	Leaf	32.389
SRR9715741	Leaf	65.730
SRR9715739	Root	5.195
SRR9715742	Root	22.983
SRR9715743	Root	19.606

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.327
SRR8749028	MeJA induced 9h	0.358
SRR8749029	MeJA induced 9h	0.110
SRR8749030	Uninduced	0.069
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.027

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	28.599
SRR8400027	Control - Root	22.207