Gene detail information of Glyur000209s00013485 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G10405.1 | 9.00E-51 | |
| NR | KEH43479.1 | 3.66E-103 | DUF3783 domain protein [Medicago truncatula] |
| trEMBL | tr|A0A072VNA0|A0A072VNA0_MEDTR | 1.00E-103 | DUF3783 domain protein {ECO:0000313|EMBL:KEH43479.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00209 | 229707 | 233738 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000209s00013485.1 | PF12646.2 | DUF3783 | 143 | 199 | 7.90E-15 |
| Glyur000209s00013485.2 | PF12646.2 | DUF3783 | 129 | 185 | 6.90E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.475 |
| SRR1783600 | control | 4.152 |
| SRR1783602 | moderate drought stress | 5.639 |
| SRR1811619 | moderate drought stress | 5.711 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.388 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.159 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.850 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.032 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.463 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.739 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 33.558 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 33.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.324 |
| SRR2868004 | Drought Stress (root) | 7.005 |
| SRR2967015 | Control (root) | 7.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.059 |
| SRR9715740 | Leaf | 29.547 |
| SRR9715741 | Leaf | 19.080 |
| SRR9715739 | Root | 1.965 |
| SRR9715742 | Root | 4.110 |
| SRR9715743 | Root | 3.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.472 |
| SRR8749028 | MeJA induced 9h | 4.764 |
| SRR8749029 | MeJA induced 9h | 4.496 |
| SRR8749030 | Uninduced | 3.623 |
| SRR8749031 | Uninduced | 1.915 |
| SRR8749032 | Uninduced | 3.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.971 |
| SRR8400027 | Control - Root | 9.784 |