Gene detail information of Glyur000209s00013473 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G31050.1 | 2.00E-42 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_007143772.1 | 0 | hypothetical protein PHAVU_007G100300g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FYJ6|BH111_ARATH | 4.00E-49 | Transcription factor bHLH111 |
| trEMBL | tr|V7BH21|V7BH21_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW15766.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00209 | 157211 | 160763 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.670 |
| SRR1783600 | control | 5.719 |
| SRR1783602 | moderate drought stress | 3.939 |
| SRR1811619 | moderate drought stress | 3.815 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.177 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.001 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.079 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.051 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.316 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.252 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.099 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.027 |
| SRR2868004 | Drought Stress (root) | 52.954 |
| SRR2967015 | Control (root) | 52.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.194 |
| SRR9715740 | Leaf | 0.068 |
| SRR9715741 | Leaf | 0.176 |
| SRR9715739 | Root | 0.540 |
| SRR9715742 | Root | 4.964 |
| SRR9715743 | Root | 4.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.077 |
| SRR8749028 | MeJA induced 9h | 0.091 |
| SRR8749029 | MeJA induced 9h | 0.148 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.898 |
| SRR8400027 | Control - Root | 17.096 |