Gene detail information of Glyur000209s00013453 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07880.1 | 6.00E-74 | Immunoglobulin E-set superfamily protein |
| NR | XP_003550475.1 | 4.12E-132 | PREDICTED: rho GDP-dissociation inhibitor 1-like [Glycine max] |
| Swissprot | tr|Q9SFC6|GDIR_ARATH | 3.00E-94 | Rho GDP-dissociation inhibitor 1 |
| trEMBL | tr|I1MR10|I1MR10_SOYBN | 2.00E-132 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G01250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00209 | 31590 | 32968 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000209s00013453.1 | PF02115.12 | Rho_GDI | 54 | 228 | 9.00E-56 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.198 |
| SRR1783600 | control | 0.235 |
| SRR1783602 | moderate drought stress | 1.008 |
| SRR1811619 | moderate drought stress | 1.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.250 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.019 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.638 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.516 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.143 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.144 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.244 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.315 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.723 |
| SRR2868004 | Drought Stress (root) | 6.699 |
| SRR2967015 | Control (root) | 7.527 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.421 |
| SRR9715740 | Leaf | 0.322 |
| SRR9715741 | Leaf | 0.409 |
| SRR9715739 | Root | 0.227 |
| SRR9715742 | Root | 0.365 |
| SRR9715743 | Root | 0.892 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.456 |
| SRR8749028 | MeJA induced 9h | 3.307 |
| SRR8749029 | MeJA induced 9h | 1.731 |
| SRR8749030 | Uninduced | 10.725 |
| SRR8749031 | Uninduced | 17.183 |
| SRR8749032 | Uninduced | 6.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.010 |
| SRR8400027 | Control - Root | 1.515 |