Gene detail

Gene detail information of Glyur000209s00013452

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G51970.1	3.00E-52	acyl-CoA sterol acyl transferase 1
NR	KHN40830.1	2.53E-148	Acyl-CoA--sterol O-acyltransferase 1 [Glycine soja]
COG	YP_760770.1	1.00E-06	alginate biosynthesis protein AlgI [Hyphomonas neptunium ATCC 15444]
Swissprot	tr\|Q9SV07\|ASAT1_ARATH	9.00E-82	Acyl-CoA--sterol O-acyltransferase 1
trEMBL	tr\|I1KZZ3\|I1KZZ3_SOYBN	1.00E-148	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G01290.1}

Sequence

Transcript Sequence

>Glyur000209s00013452.1
ATGAATATGGAGATGATGATAGAAGGAGAGATAGGGAACTTCATAATGGTATGGACCGTGGCTACGGCATCGTTGTGTTACAGCTACATAGTAGGCAAGGTGGTCCCCAAGGGTAGAGGCAGACTGGTGGCACTCTTGCCACCCATAGCCATCCTCCTCCTCCTCCCTCTCNGGCTCACCTCCATCCACCTCGCTGGCCCTTCCTCATTCTTTCTCTCATGGCTTTCCACCTTCAAGCTCCTCCTCTTCGCCTTCGGAAAAGGCCCCCTCTCTCCCAACCCTCCCCTCTCTCTCCTTCACTTCCTCCCCNTCGCCTCCCTCCCCATCAAATTCCAAGATCACCACCACCACCACAACAACCGCCCTCCCCAGAAACGATCTATCAACTATAGGACGGTAGTGATGGTTATTCTGTTCGCCTGTTTTCTCCCTCTCTACGAGAAGAAAGAGAGTTTCCATCCAATGTTCACGACCTTGTTGTATACACTCCACATGTACACGGGGATAGAGCTCTCGCTTGCGCTGGTCTCATCAATAGCACGGAGGCTCCTCCGGGTAGAGTTGGAGGCGCCTTTTGACGAGCCCTATCTGAGCACCTCGCTGCAGGACTTCTGGGGAAGGAGGTGGAACATCATGGTCACGCGTGTCCTGCACCCCACCGTATACGACCCCGTGGTGAAGGCCTCAAGCCGCGTGGTAGGGAGGAAGTGGGCCCCACTACCCGCTGTTCTCGCGACATTTGCGGTGTCGGGGGCGATGCACGAGCTAATCTTCTATTACATAAAGCGNGAGAAGCCCACGTGGGAGAGGTGGGAACCGTGTTGGGACTCCATGTGCTTCTTCCTCCTCCATGGGGTGTGTTTGGCTCTCGAGATTGCCCTCAAGAAGACCAAACCCAAATGGCGGTTGCCAAAAGCGGTTTCTTGCCTCCTCACGATGGCATTCGTGCTCTACACTGGGTTGTGCCTCTTTGTGCCGTCGCTTGCTAGGTCTCGCGCCTTTGTCAAGTCCAAGACAGAGTCTCTTGCCGTCATTCACTTCGTGAAGAACGTGTGTGACCACCTTCGGTTACCGTTACCACCGTTACTAACAAGCGAATTATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00209	26277	27633	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000209s00013452.1	PF13813.1	MBOAT_2	192	283	1.20E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.034
SRR1811619	moderate drought stress	0.034

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.097
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	5.184
SRR2868004	Drought Stress (root)	6.225
SRR2967015	Control (root)	6.182

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.593
SRR9715740	Leaf	0.349
SRR9715741	Leaf	3.282
SRR9715739	Root	0.918
SRR9715742	Root	2.531
SRR9715743	Root	1.457

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.348
SRR8749028	MeJA induced 9h	0.580
SRR8749029	MeJA induced 9h	0.402
SRR8749030	Uninduced	1.869
SRR8749031	Uninduced	0.622
SRR8749032	Uninduced	0.254

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.647
SRR8400027	Control - Root	0.661