Gene detail information of Glyur000208s00014300 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G71865.1 | 3.00E-22 | |
| NR | KEH43591.1 | 5.29E-63 | hypothetical protein MTR_1g097080 [Medicago truncatula] |
| trEMBL | tr|A0A072VPK3|A0A072VPK3_MEDTR | 2.00E-63 | Uncharacterized protein {ECO:0000313|EMBL:KEH43591.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00208 | 240338 | 241388 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 45.258 |
| SRR1783600 | control | 44.127 |
| SRR1783602 | moderate drought stress | 62.694 |
| SRR1811619 | moderate drought stress | 62.535 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 70.640 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 71.580 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.974 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.956 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 109.498 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 110.055 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 26.410 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 26.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.922 |
| SRR2868004 | Drought Stress (root) | 28.995 |
| SRR2967015 | Control (root) | 26.337 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.190 |
| SRR9715740 | Leaf | 21.853 |
| SRR9715741 | Leaf | 19.340 |
| SRR9715739 | Root | 18.267 |
| SRR9715742 | Root | 23.037 |
| SRR9715743 | Root | 16.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.440 |
| SRR8749028 | MeJA induced 9h | 11.188 |
| SRR8749029 | MeJA induced 9h | 12.457 |
| SRR8749030 | Uninduced | 3.888 |
| SRR8749031 | Uninduced | 0.737 |
| SRR8749032 | Uninduced | 1.831 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.689 |
| SRR8400027 | Control - Root | 36.306 |