Gene detail information of Glyur000208s00014276 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15090.1 | 1.00E-137 | GroES-like zinc-binding alcohol dehydrogenase family protein |
| NR | XP_003540476.1 | 0 | PREDICTED: reticulon-4-interacting protein 1, mitochondrial-like [Glycine max] |
| COG | YP_007320166.1 | 6.00E-52 | Alcohol dehydrogenase zinc-binding domain protein [Fibrella aestuarina BUZ 2] |
| Swissprot | tr|K4BW79|ENOX_SOLLC | 3.00E-28 | 2-methylene-furan-3-one reductase (Precursor) |
| trEMBL | tr|I1LV40|I1LV40_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G35620.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00208 | 111383 | 116844 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000208s00014276.1 | PF08240.7 | ADH_N | 58 | 120 | 2.70E-09 |
| Glyur000208s00014276.1 | PF13602.1 | ADH_zinc_N_2 | 220 | 363 | 8.60E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.781 |
| SRR1783600 | control | 5.883 |
| SRR1783602 | moderate drought stress | 7.013 |
| SRR1811619 | moderate drought stress | 6.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.923 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.765 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.569 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.317 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.606 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.510 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.042 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.353 |
| SRR2868004 | Drought Stress (root) | 9.511 |
| SRR2967015 | Control (root) | 10.900 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.482 |
| SRR9715740 | Leaf | 32.879 |
| SRR9715741 | Leaf | 23.682 |
| SRR9715739 | Root | 4.313 |
| SRR9715742 | Root | 5.048 |
| SRR9715743 | Root | 5.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.308 |
| SRR8749028 | MeJA induced 9h | 10.060 |
| SRR8749029 | MeJA induced 9h | 6.817 |
| SRR8749030 | Uninduced | 5.023 |
| SRR8749031 | Uninduced | 2.567 |
| SRR8749032 | Uninduced | 2.080 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.523 |
| SRR8400027 | Control - Root | 11.350 |