Gene detail information of Glyur000208s00014272 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G53200.1 | 1.00E-69 | |
| NR | XP_004489062.1 | 0 | PREDICTED: uncharacterized protein LOC101507338 [Cicer arietinum] |
| trEMBL | tr|Q9LEN6|Q9LEN6_CICAR | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CAB95828.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00208 | 81449 | 87849 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000208s00014272.1 | PF14929.1 | TAF1_subA | 27 | 605 | 8.20E-155 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.464 |
| SRR1783600 | control | 4.439 |
| SRR1783602 | moderate drought stress | 4.348 |
| SRR1811619 | moderate drought stress | 4.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.552 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.460 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.529 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.520 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.733 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.774 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.402 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.408 |
| SRR2868004 | Drought Stress (root) | 7.094 |
| SRR2967015 | Control (root) | 7.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.329 |
| SRR9715740 | Leaf | 5.942 |
| SRR9715741 | Leaf | 4.379 |
| SRR9715739 | Root | 1.262 |
| SRR9715742 | Root | 2.983 |
| SRR9715743 | Root | 2.269 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.774 |
| SRR8749028 | MeJA induced 9h | 9.686 |
| SRR8749029 | MeJA induced 9h | 4.045 |
| SRR8749030 | Uninduced | 3.464 |
| SRR8749031 | Uninduced | 2.650 |
| SRR8749032 | Uninduced | 1.795 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.839 |
| SRR8400027 | Control - Root | 10.923 |