Gene detail information of Glyur000208s00014264 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006592924.1 | 1.90E-100 | PREDICTED: uncharacterized protein LOC100801534 [Glycine max] |
| trEMBL | tr|K7LWF8|K7LWF8_SOYBN | 7.00E-101 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G35701.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00208 | 20164 | 22985 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NOZZLE |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000208s00014264.1 | PF08744.5 | NOZZLE | 25 | 100 | 5.20E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.760 |
| SRR1783600 | control | 12.035 |
| SRR1783602 | moderate drought stress | 6.753 |
| SRR1811619 | moderate drought stress | 6.576 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.579 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.092 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.167 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.849 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.049 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.392 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.633 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.098 |
| SRR2868004 | Drought Stress (root) | 11.711 |
| SRR2967015 | Control (root) | 15.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.800 |
| SRR9715740 | Leaf | 0.680 |
| SRR9715741 | Leaf | 2.529 |
| SRR9715739 | Root | 0.796 |
| SRR9715742 | Root | 2.553 |
| SRR9715743 | Root | 1.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.613 |
| SRR8749028 | MeJA induced 9h | 3.847 |
| SRR8749029 | MeJA induced 9h | 1.368 |
| SRR8749030 | Uninduced | 4.595 |
| SRR8749031 | Uninduced | 0.784 |
| SRR8749032 | Uninduced | 0.569 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.737 |
| SRR8400027 | Control - Root | 16.046 |