Gene detail information of Glyur000208s00014263 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15050.1 | 3.00E-65 | IQ-domain 10 |
| NR | XP_004489052.1 | 4.47E-172 | PREDICTED: protein IQ-DOMAIN 1-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9SF32|IQD1_ARATH | 1.00E-24 | Protein IQ-DOMAIN 1 |
| trEMBL | tr|K7M284|K7M284_SOYBN | 7.00E-172 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G34700.2} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00208 | 9015 | 13190 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.655 |
| SRR1783600 | control | 9.598 |
| SRR1783602 | moderate drought stress | 9.781 |
| SRR1811619 | moderate drought stress | 9.954 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.555 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.443 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.057 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.074 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.507 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.509 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.469 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.841 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.361 |
| SRR2868004 | Drought Stress (root) | 22.057 |
| SRR2967015 | Control (root) | 17.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.980 |
| SRR9715740 | Leaf | 2.104 |
| SRR9715741 | Leaf | 1.051 |
| SRR9715739 | Root | 0.577 |
| SRR9715742 | Root | 12.680 |
| SRR9715743 | Root | 10.518 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.034 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.043 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 42.726 |
| SRR8400027 | Control - Root | 68.179 |